Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A1P61619 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A1P61619 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A1P61619 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A1P61619 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SEC61A1P61619 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SEC61A1P61619 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A1P61619 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A1P61619 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A1P61619 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A1P61619 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A1P61619 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A1P61619 AC022413.1-201ENST00000624602 984 ntBASIC20.94■□□□□ 0.94
SEC61A1P61619 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A1P61619 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A1P61619 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SEC61A1P61619 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
SEC61A1P61619 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.93■□□□□ 0.94
SEC61A1P61619 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SEC61A1P61619 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A1P61619 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.92■□□□□ 0.94
SEC61A1P61619 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.92■□□□□ 0.94
SEC61A1P61619 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.92■□□□□ 0.94
SEC61A1P61619 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A1P61619 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SEC61A1P61619 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SEC61A1P61619 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A1P61619 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.91■□□□□ 0.94
SEC61A1P61619 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.91■□□□□ 0.94
SEC61A1P61619 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.91■□□□□ 0.94
SEC61A1P61619 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEC61A1P61619 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SEC61A1P61619 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.9■□□□□ 0.94
SEC61A1P61619 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A1P61619 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A1P61619 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SEC61A1P61619 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A1P61619 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A1P61619 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SEC61A1P61619 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A1P61619 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A1P61619 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.88■□□□□ 0.93
SEC61A1P61619 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
SEC61A1P61619 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEC61A1P61619 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
SEC61A1P61619 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEC61A1P61619 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A1P61619 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A1P61619 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.87■□□□□ 0.93
SEC61A1P61619 AC060814.1-201ENST00000554326 538 ntBASIC20.87■□□□□ 0.93
SEC61A1P61619 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.87■□□□□ 0.93
SEC61A1P61619 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A1P61619 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A1P61619 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.87■□□□□ 0.93
SEC61A1P61619 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A1P61619 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SEC61A1P61619 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.86■□□□□ 0.93
SEC61A1P61619 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.86■□□□□ 0.93
SEC61A1P61619 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A1P61619 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.86■□□□□ 0.93
SEC61A1P61619 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A1P61619 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A1P61619 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 DUSP8P4-201ENST00000399538 1761 ntBASIC20.85■□□□□ 0.93
SEC61A1P61619 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 RNF126P1-201ENST00000567452 1320 ntBASIC20.85■□□□□ 0.93
SEC61A1P61619 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SEC61A1P61619 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.85■□□□□ 0.93
SEC61A1P61619 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A1P61619 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A1P61619 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SEC61A1P61619 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.84■□□□□ 0.93
SEC61A1P61619 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SEC61A1P61619 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEC61A1P61619 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.83■□□□□ 0.93
SEC61A1P61619 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.83■□□□□ 0.93
SEC61A1P61619 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEC61A1P61619 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEC61A1P61619 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SEC61A1P61619 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEC61A1P61619 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SEC61A1P61619 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.82■□□□□ 0.92
SEC61A1P61619 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEC61A1P61619 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SEC61A1P61619 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SEC61A1P61619 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEC61A1P61619 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A1P61619 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A1P61619 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A1P61619 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms