Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 STB5YHR178W 2232 nt6.52□□□□□ -1.37
YNL040WP53960 BUG1YDL099W 1026 nt6.52□□□□□ -1.37
YNL040WP53960 MSP1YGR028W 1089 nt6.52□□□□□ -1.37
YNL040WP53960 LCB3YJL134W 1230 nt6.52□□□□□ -1.37
YNL040WP53960 YJR084WYJR084W 1272 nt6.52□□□□□ -1.37
YNL040WP53960 RGD1YBR260C 2001 nt6.52□□□□□ -1.37
YNL040WP53960 HRQ1YDR291W 3234 nt6.52□□□□□ -1.37
YNL040WP53960 RRP9YPR137W 1722 nt6.51□□□□□ -1.37
YNL040WP53960 RAD59YDL059C 717 nt6.51□□□□□ -1.37
YNL040WP53960 SDH4YDR178W 546 nt6.51□□□□□ -1.37
YNL040WP53960 DMA1YHR115C 1251 nt6.51□□□□□ -1.37
YNL040WP53960 ICT1YLR099C 1185 nt6.51□□□□□ -1.37
YNL040WP53960 SCS7YMR272C 1155 nt6.51□□□□□ -1.37
YNL040WP53960 KTR1YOR099W 1182 nt6.51□□□□□ -1.37
YNL040WP53960 ADE17YMR120C 1779 nt6.51□□□□□ -1.37
YNL040WP53960 VPS24YKL041W 675 nt6.5□□□□□ -1.37
YNL040WP53960 AVO2YMR068W 1281 nt6.5□□□□□ -1.37
YNL040WP53960 IES2YNL215W 963 nt6.5□□□□□ -1.37
YNL040WP53960 CSC1YLR241W 2349 nt6.5□□□□□ -1.37
YNL040WP53960 KEL1YHR158C 3495 nt6.49□□□□□ -1.37
YNL040WP53960 FET4YMR319C 1659 nt6.49□□□□□ -1.37
YNL040WP53960 RPS3YNL178W 723 nt6.49□□□□□ -1.37
YNL040WP53960 RVB2YPL235W 1416 nt6.49□□□□□ -1.37
YNL040WP53960 COX9YDL067C 180 nt6.48□□□□□ -1.37
YNL040WP53960 YEL075W-AYEL075W-A 612 nt6.48□□□□□ -1.37
YNL040WP53960 EFM3YJR129C 1020 nt6.48□□□□□ -1.37
YNL040WP53960 YLR463CYLR463C 552 nt6.48□□□□□ -1.37
YNL040WP53960 HXT2YMR011W 1626 nt6.47□□□□□ -1.37
YNL040WP53960 YDR278CYDR278C 318 nt6.47□□□□□ -1.37
YNL040WP53960 AAT2YLR027C 1257 nt6.47□□□□□ -1.37
YNL040WP53960 YML018CYML018C 1182 nt6.47□□□□□ -1.37
YNL040WP53960 RIX7YLL034C 2514 nt6.47□□□□□ -1.37
YNL040WP53960 YHL017WYHL017W 1599 nt6.46□□□□□ -1.38
YNL040WP53960 POP5YAL033W 522 nt6.46□□□□□ -1.38
YNL040WP53960 YML083CYML083C 1257 nt6.46□□□□□ -1.38
YNL040WP53960 YMR295CYMR295C 594 nt6.46□□□□□ -1.38
YNL040WP53960 YDR514CYDR514C 1452 nt6.46□□□□□ -1.38
YNL040WP53960 PRP24YMR268C 1335 nt6.46□□□□□ -1.38
YNL040WP53960 ILV1YER086W 1731 nt6.45□□□□□ -1.38
YNL040WP53960 PSR2YLR019W 1194 nt6.45□□□□□ -1.38
YNL040WP53960 YMC1YPR058W 924 nt6.45□□□□□ -1.38
YNL040WP53960 MCH1YDL054C 1461 nt6.45□□□□□ -1.38
YNL040WP53960 YBR284WYBR284W 2394 nt6.45□□□□□ -1.38
YNL040WP53960 CRF1YDR223W 1404 nt6.44□□□□□ -1.38
YNL040WP53960 MRPL1YDR116C 858 nt6.44□□□□□ -1.38
YNL040WP53960 TMT1YER175C 900 nt6.44□□□□□ -1.38
YNL040WP53960 MRPL10YNL284C 969 nt6.44□□□□□ -1.38
YNL040WP53960 MRC1YCL061C 3291 nt6.44□□□□□ -1.38
YNL040WP53960 YIL055CYIL055C 1884 nt6.43□□□□□ -1.38
YNL040WP53960 FYV1YDR024W 486 nt6.43□□□□□ -1.38
YNL040WP53960 HVG1YER039C 750 nt6.43□□□□□ -1.38
YNL040WP53960 YHL018WYHL018W 363 nt6.43□□□□□ -1.38
YNL040WP53960 ARA2YMR041C 1008 nt6.43□□□□□ -1.38
YNL040WP53960 EXG1YLR300W 1347 nt6.43□□□□□ -1.38
YNL040WP53960 ERG1YGR175C 1491 nt6.42□□□□□ -1.38
YNL040WP53960 TSR3YOR006C 942 nt6.42□□□□□ -1.38
YNL040WP53960 RPL21AYBR191W 483 nt6.42□□□□□ -1.38
YNL040WP53960 YOL036WYOL036W 2286 nt6.42□□□□□ -1.38
YNL040WP53960 PYK2YOR347C 1521 nt6.41□□□□□ -1.38
YNL040WP53960 NAS6YGR232W 687 nt6.41□□□□□ -1.38
YNL040WP53960 ECM14YHR132C 1293 nt6.41□□□□□ -1.38
YNL040WP53960 MGM101YJR144W 810 nt6.41□□□□□ -1.38
YNL040WP53960 YML133CYML133C 4125 nt6.41□□□□□ -1.38
YNL040WP53960 POX1YGL205W 2247 nt6.41□□□□□ -1.38
YNL040WP53960 DSF1YEL070W 1509 nt6.4□□□□□ -1.38
YNL040WP53960 YNR073CYNR073C 1509 nt6.4□□□□□ -1.38
YNL040WP53960 YDR387CYDR387C 1668 nt6.4□□□□□ -1.38
YNL040WP53960 OAC1YKL120W 975 nt6.4□□□□□ -1.38
YNL040WP53960 UBP13YBL067C 2244 nt6.4□□□□□ -1.39
YNL040WP53960 PYC2YBR218C 3543 nt6.39□□□□□ -1.39
YNL040WP53960 LAG2YOL025W 1983 nt6.39□□□□□ -1.39
YNL040WP53960 ACS1YAL054C 2142 nt6.39□□□□□ -1.39
YNL040WP53960 QRI5YLR204W 336 nt6.39□□□□□ -1.39
YNL040WP53960 ESC8YOL017W 2145 nt6.39□□□□□ -1.39
YNL040WP53960 YTP1YNL237W 1380 nt6.39□□□□□ -1.39
YNL040WP53960 EFT2YDR385W 2529 nt6.38□□□□□ -1.39
YNL040WP53960 EFT1YOR133W 2529 nt6.38□□□□□ -1.39
YNL040WP53960 YHR070C-AYHR070C-A 411 nt6.38□□□□□ -1.39
YNL040WP53960 FSF1YOR271C 984 nt6.38□□□□□ -1.39
YNL040WP53960 YCK1YHR135C 1617 nt6.38□□□□□ -1.39
YNL040WP53960 YLL067CYLL067C 3618 nt6.37□□□□□ -1.39
YNL040WP53960 MAK31YCR020C-A 267 nt6.37□□□□□ -1.39
YNL040WP53960 YET3YDL072C 612 nt6.37□□□□□ -1.39
YNL040WP53960 RNH201YNL072W 924 nt6.37□□□□□ -1.39
YNL040WP53960 DAP1YPL170W 459 nt6.37□□□□□ -1.39
YNL040WP53960 RMD9YGL107C 1941 nt6.37□□□□□ -1.39
YNL040WP53960 RSA4YCR072C 1548 nt6.36□□□□□ -1.39
YNL040WP53960 CNE1YAL058W 1509 nt6.35□□□□□ -1.39
YNL040WP53960 VPS5YOR069W 2028 nt6.35□□□□□ -1.39
YNL040WP53960 CYC8YBR112C 2901 nt6.35□□□□□ -1.39
YNL040WP53960 YHR213W-AYHR213W-A 234 nt6.35□□□□□ -1.39
YNL040WP53960 RRS1YOR294W 612 nt6.35□□□□□ -1.39
YNL040WP53960 NMD5YJR132W 3147 nt6.35□□□□□ -1.39
YNL040WP53960 AFG1YEL052W 1530 nt6.35□□□□□ -1.39
YNL040WP53960 YDR015CYDR015C 240 nt6.34□□□□□ -1.39
YNL040WP53960 QCR6YFR033C 444 nt6.34□□□□□ -1.39
YNL040WP53960 YGL235WYGL235W 537 nt6.34□□□□□ -1.39
YNL040WP53960 YNL285WYNL285W 372 nt6.34□□□□□ -1.39
YNL040WP53960 WHI2YOR043W 1461 nt6.34□□□□□ -1.4
YNL040WP53960 HDA1YNL021W 2121 nt6.34□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms