Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A12P48065 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SLC6A12P48065 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A12P48065 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A12P48065 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SLC6A12P48065 MIR3960-201ENST00000583311 91 ntBASIC23.47■■□□□ 1.35
SLC6A12P48065 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC6A12P48065 AC096887.2-201ENST00000623443 1957 ntBASIC23.47■■□□□ 1.35
SLC6A12P48065 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC6A12P48065 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SLC6A12P48065 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.46■■□□□ 1.35
SLC6A12P48065 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SLC6A12P48065 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
SLC6A12P48065 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.46■■□□□ 1.35
SLC6A12P48065 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC6A12P48065 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SLC6A12P48065 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SLC6A12P48065 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC6A12P48065 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A12P48065 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC6A12P48065 GPX1-201ENST00000419349 1106 ntBASIC23.45■■□□□ 1.34
SLC6A12P48065 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A12P48065 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A12P48065 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SLC6A12P48065 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A12P48065 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.44■■□□□ 1.34
SLC6A12P48065 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A12P48065 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.44■■□□□ 1.34
SLC6A12P48065 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.43■■□□□ 1.34
SLC6A12P48065 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.43■■□□□ 1.34
SLC6A12P48065 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SLC6A12P48065 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.42■■□□□ 1.34
SLC6A12P48065 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
SLC6A12P48065 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.42■■□□□ 1.34
SLC6A12P48065 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
SLC6A12P48065 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A12P48065 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.41■■□□□ 1.34
SLC6A12P48065 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.41■■□□□ 1.34
SLC6A12P48065 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.41■■□□□ 1.34
SLC6A12P48065 AC020928.2-201ENST00000588717 2197 ntBASIC23.41■■□□□ 1.34
SLC6A12P48065 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A12P48065 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SLC6A12P48065 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SLC6A12P48065 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.4■■□□□ 1.34
SLC6A12P48065 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC6A12P48065 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC6A12P48065 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLC6A12P48065 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SLC6A12P48065 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC6A12P48065 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SLC6A12P48065 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SLC6A12P48065 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SLC6A12P48065 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC6A12P48065 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SLC6A12P48065 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SLC6A12P48065 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
SLC6A12P48065 RP9P-202ENST00000450133 1212 ntBASIC23.38■■□□□ 1.33
SLC6A12P48065 AC007029.1-201ENST00000604183 313 ntBASIC23.38■■□□□ 1.33
SLC6A12P48065 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC6A12P48065 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLC6A12P48065 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SLC6A12P48065 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
SLC6A12P48065 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC6A12P48065 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
SLC6A12P48065 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC6A12P48065 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.37■■□□□ 1.33
SLC6A12P48065 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.36■■□□□ 1.33
SLC6A12P48065 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.36■■□□□ 1.33
SLC6A12P48065 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.36■■□□□ 1.33
SLC6A12P48065 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SLC6A12P48065 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A12P48065 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC6A12P48065 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SLC6A12P48065 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SLC6A12P48065 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC6A12P48065 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
SLC6A12P48065 AC093536.1-201ENST00000569153 554 ntBASIC23.34■■□□□ 1.33
SLC6A12P48065 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.34■■□□□ 1.33
SLC6A12P48065 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC6A12P48065 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC6A12P48065 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC6A12P48065 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SLC6A12P48065 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.33■■□□□ 1.33
SLC6A12P48065 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC6A12P48065 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC6A12P48065 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC6A12P48065 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC6A12P48065 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLC6A12P48065 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.32■■□□□ 1.32
SLC6A12P48065 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC6A12P48065 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC6A12P48065 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.31■■□□□ 1.32
SLC6A12P48065 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms