Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 MDM31YHR194W 1740 nt9.37□□□□□ -0.91
TY1B-JR1P47098 MDH3YDL078C 1032 nt9.37□□□□□ -0.91
TY1B-JR1P47098 YDL085C-AYDL085C-A 207 nt9.37□□□□□ -0.91
TY1B-JR1P47098 ERG3YLR056W 1098 nt9.37□□□□□ -0.91
TY1B-JR1P47098 SEC24YIL109C 2781 nt9.37□□□□□ -0.91
TY1B-JR1P47098 KNH1YDL049C 807 nt9.36□□□□□ -0.91
TY1B-JR1P47098 HXK1YFR053C 1458 nt9.36□□□□□ -0.91
TY1B-JR1P47098 PRI2YKL045W 1587 nt9.36□□□□□ -0.91
TY1B-JR1P47098 AIM24YJR080C 1185 nt9.35□□□□□ -0.91
TY1B-JR1P47098 YNL019CYNL019C 855 nt9.35□□□□□ -0.91
TY1B-JR1P47098 YNL033WYNL033W 855 nt9.35□□□□□ -0.91
TY1B-JR1P47098 UBC11YOR339C 471 nt9.35□□□□□ -0.91
TY1B-JR1P47098 LCB3YJL134W 1230 nt9.35□□□□□ -0.91
TY1B-JR1P47098 POP5YAL033W 522 nt9.35□□□□□ -0.91
TY1B-JR1P47098 PSY4YBL046W 1326 nt9.35□□□□□ -0.91
TY1B-JR1P47098 TMT1YER175C 900 nt9.34□□□□□ -0.91
TY1B-JR1P47098 SPE4YLR146C 903 nt9.34□□□□□ -0.91
TY1B-JR1P47098 IES2YNL215W 963 nt9.34□□□□□ -0.91
TY1B-JR1P47098 PRB1YEL060C 1908 nt9.33□□□□□ -0.92
TY1B-JR1P47098 ARP2YDL029W 1176 nt9.33□□□□□ -0.92
TY1B-JR1P47098 CBP4YGR174C 513 nt9.33□□□□□ -0.92
TY1B-JR1P47098 TOS6YNL300W 309 nt9.33□□□□□ -0.92
TY1B-JR1P47098 YPR114WYPR114W 948 nt9.33□□□□□ -0.92
TY1B-JR1P47098 ARR3YPR201W 1215 nt9.33□□□□□ -0.92
TY1B-JR1P47098 YDL114WYDL114W 927 nt9.32□□□□□ -0.92
TY1B-JR1P47098 YLR123CYLR123C 330 nt9.32□□□□□ -0.92
TY1B-JR1P47098 HAP3YBL021C 435 nt9.32□□□□□ -0.92
TY1B-JR1P47098 MRPL36YBR122C 534 nt9.32□□□□□ -0.92
TY1B-JR1P47098 MIP1YOR330C 3765 nt9.32□□□□□ -0.92
TY1B-JR1P47098 YJL225CYJL225C 5277 nt9.31□□□□□ -0.92
TY1B-JR1P47098 YLL066CYLL066C 3618 nt9.31□□□□□ -0.92
TY1B-JR1P47098 YLL067CYLL067C 3618 nt9.31□□□□□ -0.92
TY1B-JR1P47098 CDC34YDR054C 888 nt9.31□□□□□ -0.92
TY1B-JR1P47098 YDR415CYDR415C 1125 nt9.31□□□□□ -0.92
TY1B-JR1P47098 YFR034W-AYFR034W-A 288 nt9.31□□□□□ -0.92
TY1B-JR1P47098 UTR2YEL040W 1404 nt9.31□□□□□ -0.92
TY1B-JR1P47098 TKL2YBR117C 2046 nt9.3□□□□□ -0.92
TY1B-JR1P47098 RRP4YHR069C 1080 nt9.3□□□□□ -0.92
TY1B-JR1P47098 GCN3YKR026C 918 nt9.3□□□□□ -0.92
TY1B-JR1P47098 TSA1YML028W 591 nt9.3□□□□□ -0.92
TY1B-JR1P47098 HSP26YBR072W 645 nt9.3□□□□□ -0.92
TY1B-JR1P47098 RAD24YER173W 1980 nt9.3□□□□□ -0.92
TY1B-JR1P47098 YJR015WYJR015W 1533 nt9.3□□□□□ -0.92
TY1B-JR1P47098 MCH1YDL054C 1461 nt9.3□□□□□ -0.92
TY1B-JR1P47098 YEL068CYEL068C 333 nt9.29□□□□□ -0.92
TY1B-JR1P47098 ERI1YPL096C-A 207 nt9.29□□□□□ -0.92
TY1B-JR1P47098 YMR155WYMR155W 1644 nt9.29□□□□□ -0.92
TY1B-JR1P47098 YKL031WYKL031W 414 nt9.29□□□□□ -0.92
TY1B-JR1P47098 RGT2YDL138W 2292 nt9.28□□□□□ -0.92
TY1B-JR1P47098 YER137CYER137C 447 nt9.28□□□□□ -0.92
TY1B-JR1P47098 PMA2YPL036W 2844 nt9.28□□□□□ -0.92
TY1B-JR1P47098 YIR042CYIR042C 711 nt9.27□□□□□ -0.93
TY1B-JR1P47098 YAL056C-AYAL056C-A 351 nt9.27□□□□□ -0.93
TY1B-JR1P47098 CNE1YAL058W 1509 nt9.26□□□□□ -0.93
TY1B-JR1P47098 YJR107WYJR107W 987 nt9.26□□□□□ -0.93
TY1B-JR1P47098 MCM3YEL032W 2916 nt9.26□□□□□ -0.93
TY1B-JR1P47098 PRC1YMR297W 1599 nt9.25□□□□□ -0.93
TY1B-JR1P47098 PEX13YLR191W 1161 nt9.24□□□□□ -0.93
TY1B-JR1P47098 SFC1YJR095W 969 nt9.24□□□□□ -0.93
TY1B-JR1P47098 CCP1YKR066C 1086 nt9.24□□□□□ -0.93
TY1B-JR1P47098 MDL2YPL270W 2322 nt9.23□□□□□ -0.93
TY1B-JR1P47098 CHA1YCL064C 1083 nt9.22□□□□□ -0.93
TY1B-JR1P47098 CAR1YPL111W 1002 nt9.22□□□□□ -0.93
TY1B-JR1P47098 NUD1YOR373W 2556 nt9.22□□□□□ -0.93
TY1B-JR1P47098 tX(XXX)DtX(XXX)D 100 nt9.22□□□□□ -0.93
TY1B-JR1P47098 YBR230W-AYBR230W-A 201 nt9.21□□□□□ -0.94
TY1B-JR1P47098 MET2YNL277W 1461 nt9.21□□□□□ -0.94
TY1B-JR1P47098 MRPS16YPL013C 366 nt9.2□□□□□ -0.94
TY1B-JR1P47098 RFC1YOR217W 2586 nt9.2□□□□□ -0.94
TY1B-JR1P47098 ARC35YNR035C 1029 nt9.19□□□□□ -0.94
TY1B-JR1P47098 HSM3YBR272C 1443 nt9.19□□□□□ -0.94
TY1B-JR1P47098 SEC20YDR498C 1152 nt9.19□□□□□ -0.94
TY1B-JR1P47098 GAA1YLR088W 1845 nt9.18□□□□□ -0.94
TY1B-JR1P47098 YFL064CYFL064C 525 nt9.17□□□□□ -0.94
TY1B-JR1P47098 tR(ACG)DtR(ACG)D 73 nt9.17□□□□□ -0.94
TY1B-JR1P47098 tR(ACG)EtR(ACG)E 73 nt9.17□□□□□ -0.94
TY1B-JR1P47098 tR(ACG)KtR(ACG)K 73 nt9.17□□□□□ -0.94
TY1B-JR1P47098 tR(ACG)LtR(ACG)L 73 nt9.17□□□□□ -0.94
TY1B-JR1P47098 tR(ACG)OtR(ACG)O 73 nt9.17□□□□□ -0.94
TY1B-JR1P47098 YNR014WYNR014W 639 nt9.17□□□□□ -0.94
TY1B-JR1P47098 YPR202WYPR202W 717 nt9.17□□□□□ -0.94
TY1B-JR1P47098 RPL21AYBR191W 483 nt9.17□□□□□ -0.94
TY1B-JR1P47098 ICT1YLR099C 1185 nt9.17□□□□□ -0.94
TY1B-JR1P47098 RPS9AYPL081W 594 nt9.17□□□□□ -0.94
TY1B-JR1P47098 ATG4YNL223W 1485 nt9.16□□□□□ -0.94
TY1B-JR1P47098 LDS1YAL018C 978 nt9.16□□□□□ -0.94
TY1B-JR1P47098 ATG33YLR356W 594 nt9.16□□□□□ -0.94
TY1B-JR1P47098 SOG2YOR353C 2376 nt9.16□□□□□ -0.94
TY1B-JR1P47098 TRR1YDR353W 960 nt9.15□□□□□ -0.94
TY1B-JR1P47098 UFD1YGR048W 1086 nt9.15□□□□□ -0.94
TY1B-JR1P47098 APE3YBR286W 1614 nt9.15□□□□□ -0.95
TY1B-JR1P47098 HDA1YNL021W 2121 nt9.15□□□□□ -0.95
TY1B-JR1P47098 MLC1YGL106W 450 nt9.14□□□□□ -0.95
TY1B-JR1P47098 YMR119W-AYMR119W-A 375 nt9.14□□□□□ -0.95
TY1B-JR1P47098 WHI2YOR043W 1461 nt9.14□□□□□ -0.95
TY1B-JR1P47098 YKR032WYKR032W 315 nt9.14□□□□□ -0.95
TY1B-JR1P47098 BSC4YNL269W 396 nt9.14□□□□□ -0.95
TY1B-JR1P47098 COX16YJL003W 357 nt9.13□□□□□ -0.95
TY1B-JR1P47098 YGL235WYGL235W 537 nt9.12□□□□□ -0.95
TY1B-JR1P47098 KTR1YOR099W 1182 nt9.12□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms