Protein–RNA interactions for Protein: P40489

XBP1, Transcriptional repressor XBP1, yeastyeast

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XBP1P40489 SVF1YDR346C 1446 nt5.74□□□□□ -1.49
XBP1P40489 ERG12YMR208W 1332 nt5.74□□□□□ -1.49
XBP1P40489 SLA2YNL243W 2907 nt5.73□□□□□ -1.49
XBP1P40489 RSP5YER125W 2430 nt5.73□□□□□ -1.49
XBP1P40489 YDR415CYDR415C 1125 nt5.73□□□□□ -1.49
XBP1P40489 AIM33YML087C 939 nt5.73□□□□□ -1.49
XBP1P40489 YMR295CYMR295C 594 nt5.73□□□□□ -1.49
XBP1P40489 TOS6YNL300W 309 nt5.73□□□□□ -1.49
XBP1P40489 DOT1YDR440W 1749 nt5.73□□□□□ -1.49
XBP1P40489 RGT2YDL138W 2292 nt5.73□□□□□ -1.49
XBP1P40489 GPD2YOL059W 1323 nt5.73□□□□□ -1.49
XBP1P40489 SKY1YMR216C 2229 nt5.72□□□□□ -1.49
XBP1P40489 PPM2YOL141W 2088 nt5.72□□□□□ -1.49
XBP1P40489 YSC83YHR017W 1158 nt5.72□□□□□ -1.49
XBP1P40489 YAL016C-BYAL016C-B 186 nt5.72□□□□□ -1.49
XBP1P40489 MRPL10YNL284C 969 nt5.72□□□□□ -1.49
XBP1P40489 PHO3YBR092C 1404 nt5.72□□□□□ -1.49
XBP1P40489 YIL092WYIL092W 1902 nt5.72□□□□□ -1.49
XBP1P40489 MSP1YGR028W 1089 nt5.71□□□□□ -1.5
XBP1P40489 tR(UCU)Q1tR(UCU)Q1 73 nt5.71□□□□□ -1.5
XBP1P40489 YKR032WYKR032W 315 nt5.71□□□□□ -1.5
XBP1P40489 IRC11YOR013W 471 nt5.71□□□□□ -1.5
XBP1P40489 GPA1YHR005C 1419 nt5.71□□□□□ -1.5
XBP1P40489 COQ1YBR003W 1422 nt5.71□□□□□ -1.5
XBP1P40489 ATG36YJL185C 882 nt5.7□□□□□ -1.5
XBP1P40489 TIF34YMR146C 1044 nt5.7□□□□□ -1.5
XBP1P40489 COQ3YOL096C 939 nt5.7□□□□□ -1.5
XBP1P40489 YHR020WYHR020W 2067 nt5.7□□□□□ -1.5
XBP1P40489 SES1YDR023W 1389 nt5.69□□□□□ -1.5
XBP1P40489 YPT1YFL038C 621 nt5.69□□□□□ -1.5
XBP1P40489 UBC12YLR306W 567 nt5.69□□□□□ -1.5
XBP1P40489 CTF19YPL018W 1110 nt5.69□□□□□ -1.5
XBP1P40489 snR34snR34 203 nt5.69□□□□□ -1.5
XBP1P40489 SGV1YPR161C 1974 nt5.69□□□□□ -1.5
XBP1P40489 NEM1YHR004C 1341 nt5.69□□□□□ -1.5
XBP1P40489 CCT8YJL008C 1707 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)BtG(GCC)B 71 nt5.68□□□□□ -1.5
XBP1P40489 SUF16tG(GCC)C 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)D1tG(GCC)D1 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)D2tG(GCC)D2 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)EtG(GCC)E 71 nt5.68□□□□□ -1.5
XBP1P40489 SUF20tG(GCC)F1 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)F2tG(GCC)F2 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)G1tG(GCC)G1 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)G2tG(GCC)G2 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)J1tG(GCC)J1 71 nt5.68□□□□□ -1.5
XBP1P40489 SUF23tG(GCC)J2 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)MtG(GCC)M 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)O1tG(GCC)O1 71 nt5.68□□□□□ -1.5
XBP1P40489 SUF17tG(GCC)O2 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)P1tG(GCC)P1 71 nt5.68□□□□□ -1.5
XBP1P40489 tG(GCC)P2tG(GCC)P2 71 nt5.68□□□□□ -1.5
XBP1P40489 ARC19YKL013C 516 nt5.68□□□□□ -1.5
XBP1P40489 YNL097W-AYNL097W-A 156 nt5.68□□□□□ -1.5
XBP1P40489 STD1YOR047C 1335 nt5.68□□□□□ -1.5
XBP1P40489 HEM1YDR232W 1647 nt5.67□□□□□ -1.5
XBP1P40489 YMR279CYMR279C 1623 nt5.67□□□□□ -1.5
XBP1P40489 MED6YHR058C 888 nt5.67□□□□□ -1.5
XBP1P40489 RUF23RUF23 254 nt5.67□□□□□ -1.5
XBP1P40489 YNR048WYNR048W 1182 nt5.67□□□□□ -1.5
XBP1P40489 SUF5tG(CCC)O 72 nt5.66□□□□□ -1.5
XBP1P40489 PRE3YJL001W 648 nt5.66□□□□□ -1.5
XBP1P40489 ECM30YLR436C 3825 nt5.66□□□□□ -1.5
XBP1P40489 YOL079WYOL079W 399 nt5.66□□□□□ -1.5
XBP1P40489 RFC4YOL094C 972 nt5.66□□□□□ -1.5
XBP1P40489 YKR023WYKR023W 1593 nt5.66□□□□□ -1.5
XBP1P40489 GLN3YER040W 2193 nt5.65□□□□□ -1.5
XBP1P40489 TIM22YDL217C 624 nt5.65□□□□□ -1.5
XBP1P40489 FAL1YDR021W 1200 nt5.65□□□□□ -1.5
XBP1P40489 LYS1YIR034C 1122 nt5.65□□□□□ -1.5
XBP1P40489 YOR300WYOR300W 309 nt5.65□□□□□ -1.5
XBP1P40489 CDS1YBR029C 1374 nt5.65□□□□□ -1.51
XBP1P40489 PRY3YJL078C 2646 nt5.64□□□□□ -1.51
XBP1P40489 EDE1YBL047C 4146 nt5.64□□□□□ -1.51
XBP1P40489 FRE5YOR384W 2085 nt5.64□□□□□ -1.51
XBP1P40489 HGH1YGR187C 1185 nt5.64□□□□□ -1.51
XBP1P40489 MPC2YHR162W 390 nt5.64□□□□□ -1.51
XBP1P40489 COX3Q0275 810 nt5.64□□□□□ -1.51
XBP1P40489 TAF11YML015C 1041 nt5.64□□□□□ -1.51
XBP1P40489 COX5AYNL052W 462 nt5.64□□□□□ -1.51
XBP1P40489 ISR1YPR106W 1332 nt5.64□□□□□ -1.51
XBP1P40489 AIM3YBR108W 2844 nt5.64□□□□□ -1.51
XBP1P40489 CCC2YDR270W 3015 nt5.64□□□□□ -1.51
XBP1P40489 QCR6YFR033C 444 nt5.63□□□□□ -1.51
XBP1P40489 FBA1YKL060C 1080 nt5.63□□□□□ -1.51
XBP1P40489 SPC24YMR117C 642 nt5.63□□□□□ -1.51
XBP1P40489 MSO1YNR049C 633 nt5.63□□□□□ -1.51
XBP1P40489 RPS28AYOR167C 204 nt5.63□□□□□ -1.51
XBP1P40489 AME1YBR211C 975 nt5.63□□□□□ -1.51
XBP1P40489 SGF29YCL010C 780 nt5.63□□□□□ -1.51
XBP1P40489 ATG23YLR431C 1362 nt5.63□□□□□ -1.51
XBP1P40489 HDA1YNL021W 2121 nt5.63□□□□□ -1.51
XBP1P40489 PMT3YOR321W 2262 nt5.62□□□□□ -1.51
XBP1P40489 YDL157CYDL157C 357 nt5.62□□□□□ -1.51
XBP1P40489 YLR283WYLR283W 945 nt5.62□□□□□ -1.51
XBP1P40489 DIA1YMR316W 1011 nt5.62□□□□□ -1.51
XBP1P40489 SLD7YOR060C 774 nt5.62□□□□□ -1.51
XBP1P40489 YPL257WYPL257W 582 nt5.62□□□□□ -1.51
XBP1P40489 PEX34YCL056C 435 nt5.62□□□□□ -1.51
XBP1P40489 ERG1YGR175C 1491 nt5.62□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms