Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 tG(GCC)D1tG(GCC)D1 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)D2tG(GCC)D2 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)EtG(GCC)E 71 nt6.33□□□□□ -1.4
LSM5P40089 SUF20tG(GCC)F1 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)F2tG(GCC)F2 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)G1tG(GCC)G1 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)G2tG(GCC)G2 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)J1tG(GCC)J1 71 nt6.33□□□□□ -1.4
LSM5P40089 VMA3YEL027W 483 nt6.33□□□□□ -1.4
LSM5P40089 SUF23tG(GCC)J2 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)MtG(GCC)M 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)O1tG(GCC)O1 71 nt6.33□□□□□ -1.4
LSM5P40089 SUF17tG(GCC)O2 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)P1tG(GCC)P1 71 nt6.33□□□□□ -1.4
LSM5P40089 tG(GCC)P2tG(GCC)P2 71 nt6.33□□□□□ -1.4
LSM5P40089 NCS6YGL211W 1080 nt6.33□□□□□ -1.4
LSM5P40089 LYS1YIR034C 1122 nt6.33□□□□□ -1.4
LSM5P40089 JJJ3YJR097W 519 nt6.33□□□□□ -1.4
LSM5P40089 MIA40YKL195W 1212 nt6.33□□□□□ -1.4
LSM5P40089 YNR014WYNR014W 639 nt6.33□□□□□ -1.4
LSM5P40089 EMP65YER140W 1671 nt6.33□□□□□ -1.4
LSM5P40089 CHL4YDR254W 1377 nt6.32□□□□□ -1.4
LSM5P40089 ARP3YJR065C 1350 nt6.32□□□□□ -1.4
LSM5P40089 VTS1YOR359W 1572 nt6.32□□□□□ -1.4
LSM5P40089 PPH22YDL188C 1134 nt6.32□□□□□ -1.4
LSM5P40089 YEL075W-AYEL075W-A 612 nt6.32□□□□□ -1.4
LSM5P40089 ATG36YJL185C 882 nt6.32□□□□□ -1.4
LSM5P40089 YLR463CYLR463C 552 nt6.32□□□□□ -1.4
LSM5P40089 CLN1YMR199W 1641 nt6.32□□□□□ -1.4
LSM5P40089 BNA5YLR231C 1362 nt6.31□□□□□ -1.4
LSM5P40089 ZWF1YNL241C 1518 nt6.31□□□□□ -1.4
LSM5P40089 RRP9YPR137W 1722 nt6.31□□□□□ -1.4
LSM5P40089 ARE2YNR019W 1929 nt6.31□□□□□ -1.4
LSM5P40089 MSP1YGR028W 1089 nt6.31□□□□□ -1.4
LSM5P40089 MED6YHR058C 888 nt6.31□□□□□ -1.4
LSM5P40089 CTF8YHR191C 402 nt6.31□□□□□ -1.4
LSM5P40089 TDH2YJR009C 999 nt6.31□□□□□ -1.4
LSM5P40089 YML018CYML018C 1182 nt6.31□□□□□ -1.4
LSM5P40089 SUR7YML052W 909 nt6.31□□□□□ -1.4
LSM5P40089 YLL066CYLL066C 3618 nt6.31□□□□□ -1.4
LSM5P40089 ARO10YDR380W 1908 nt6.31□□□□□ -1.4
LSM5P40089 ASN1YPR145W 1719 nt6.3□□□□□ -1.4
LSM5P40089 SPG1YGR236C 288 nt6.3□□□□□ -1.4
LSM5P40089 COX16YJL003W 357 nt6.3□□□□□ -1.4
LSM5P40089 YJR146WYJR146W 354 nt6.3□□□□□ -1.4
LSM5P40089 GCN3YKR026C 918 nt6.3□□□□□ -1.4
LSM5P40089 YGR054WYGR054W 1929 nt6.3□□□□□ -1.4
LSM5P40089 GUS1YGL245W 2127 nt6.29□□□□□ -1.4
LSM5P40089 SCS7YMR272C 1155 nt6.29□□□□□ -1.4
LSM5P40089 RDL2YOR286W 450 nt6.29□□□□□ -1.4
LSM5P40089 DDC1YPL194W 1839 nt6.29□□□□□ -1.4
LSM5P40089 BDF2YDL070W 1917 nt6.29□□□□□ -1.4
LSM5P40089 TKL2YBR117C 2046 nt6.28□□□□□ -1.4
LSM5P40089 RSP5YER125W 2430 nt6.28□□□□□ -1.4
LSM5P40089 SKY1YMR216C 2229 nt6.28□□□□□ -1.4
LSM5P40089 OPI8YKR035C 642 nt6.28□□□□□ -1.4
LSM5P40089 SRL2YLR082C 1179 nt6.28□□□□□ -1.4
LSM5P40089 RUF23RUF23 254 nt6.28□□□□□ -1.4
LSM5P40089 EDE1YBL047C 4146 nt6.27□□□□□ -1.4
LSM5P40089 ACO1YLR304C 2337 nt6.27□□□□□ -1.41
LSM5P40089 YPL250W-AYPL250W-A 288 nt6.27□□□□□ -1.41
LSM5P40089 APM4YOL062C 1476 nt6.27□□□□□ -1.41
LSM5P40089 HEM1YDR232W 1647 nt6.26□□□□□ -1.41
LSM5P40089 YMR279CYMR279C 1623 nt6.26□□□□□ -1.41
LSM5P40089 HSP12YFL014W 330 nt6.26□□□□□ -1.41
LSM5P40089 YGL072CYGL072C 360 nt6.26□□□□□ -1.41
LSM5P40089 MDE1YJR024C 735 nt6.26□□□□□ -1.41
LSM5P40089 PEX31YGR004W 1389 nt6.26□□□□□ -1.41
LSM5P40089 TRP5YGL026C 2124 nt6.26□□□□□ -1.41
LSM5P40089 VMS1YDR049W 1899 nt6.26□□□□□ -1.41
LSM5P40089 ECM38YLR299W 1983 nt6.26□□□□□ -1.41
LSM5P40089 PET112YBL080C 1626 nt6.25□□□□□ -1.41
LSM5P40089 YDL085C-AYDL085C-A 207 nt6.25□□□□□ -1.41
LSM5P40089 YJU2YKL095W 837 nt6.25□□□□□ -1.41
LSM5P40089 GTO3YMR251W 1101 nt6.25□□□□□ -1.41
LSM5P40089 PTC4YBR125C 1182 nt6.25□□□□□ -1.41
LSM5P40089 IVY1YDR229W 1362 nt6.25□□□□□ -1.41
LSM5P40089 PTC3YBL056W 1407 nt6.25□□□□□ -1.41
LSM5P40089 FPR2YDR519W 408 nt6.24□□□□□ -1.41
LSM5P40089 HEM2YGL040C 1029 nt6.24□□□□□ -1.41
LSM5P40089 YKR032WYKR032W 315 nt6.24□□□□□ -1.41
LSM5P40089 OGG1YML060W 1131 nt6.24□□□□□ -1.41
LSM5P40089 KSH1YNL024C-A 219 nt6.24□□□□□ -1.41
LSM5P40089 YNL120CYNL120C 486 nt6.24□□□□□ -1.41
LSM5P40089 MRPL10YNL284C 969 nt6.24□□□□□ -1.41
LSM5P40089 YMR155WYMR155W 1644 nt6.24□□□□□ -1.41
LSM5P40089 CNM67YNL225C 1746 nt6.23□□□□□ -1.41
LSM5P40089 YDR415CYDR415C 1125 nt6.23□□□□□ -1.41
LSM5P40089 MPC2YHR162W 390 nt6.23□□□□□ -1.41
LSM5P40089 VPS24YKL041W 675 nt6.23□□□□□ -1.41
LSM5P40089 YMR295CYMR295C 594 nt6.23□□□□□ -1.41
LSM5P40089 TOS6YNL300W 309 nt6.23□□□□□ -1.41
LSM5P40089 YLL067CYLL067C 3618 nt6.23□□□□□ -1.41
LSM5P40089 IMA2YOL157C 1770 nt6.23□□□□□ -1.41
LSM5P40089 YPR196WYPR196W 1413 nt6.23□□□□□ -1.41
LSM5P40089 HIS7YBR248C 1659 nt6.23□□□□□ -1.41
LSM5P40089 ECM7YLR443W 1347 nt6.23□□□□□ -1.41
LSM5P40089 GTT3YEL017W 1014 nt6.22□□□□□ -1.41
LSM5P40089 YPT1YFL038C 621 nt6.22□□□□□ -1.41
LSM5P40089 FPR3YML074C 1236 nt6.22□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms