Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
KRT9P35527 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KRT9P35527 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.38■■□□□ 1.81
KRT9P35527 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
KRT9P35527 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.38■■□□□ 1.81
KRT9P35527 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
KRT9P35527 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
KRT9P35527 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT9P35527 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.37■■□□□ 1.81
KRT9P35527 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT9P35527 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KRT9P35527 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
KRT9P35527 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
KRT9P35527 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT9P35527 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
KRT9P35527 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.36■■□□□ 1.81
KRT9P35527 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.36■■□□□ 1.81
KRT9P35527 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
KRT9P35527 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT9P35527 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.35■■□□□ 1.81
KRT9P35527 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT9P35527 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT9P35527 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT9P35527 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
KRT9P35527 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.34■■□□□ 1.81
KRT9P35527 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT9P35527 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT9P35527 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT9P35527 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT9P35527 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT9P35527 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT9P35527 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.33■■□□□ 1.8
KRT9P35527 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.8
KRT9P35527 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT9P35527 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT9P35527 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 AC142381.3-201ENST00000568208 1670 ntBASIC26.31■■□□□ 1.8
KRT9P35527 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.31■■□□□ 1.8
KRT9P35527 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT9P35527 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.31■■□□□ 1.8
KRT9P35527 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT9P35527 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.3■■□□□ 1.8
KRT9P35527 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KRT9P35527 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT9P35527 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT9P35527 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT9P35527 MIR639-201ENST00000384974 98 ntBASIC26.29■■□□□ 1.8
KRT9P35527 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KRT9P35527 AC096887.2-201ENST00000623443 1957 ntBASIC26.29■■□□□ 1.8
KRT9P35527 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
KRT9P35527 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
KRT9P35527 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT9P35527 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT9P35527 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT9P35527 AC022211.4-201ENST00000625094 2161 ntBASIC26.27■■□□□ 1.8
KRT9P35527 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KRT9P35527 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.27■■□□□ 1.8
KRT9P35527 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
KRT9P35527 AL359258.2-201ENST00000564063 1566 ntBASIC26.26■■□□□ 1.79
KRT9P35527 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT9P35527 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KRT9P35527 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.26■■□□□ 1.79
KRT9P35527 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
KRT9P35527 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
KRT9P35527 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KRT9P35527 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
KRT9P35527 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT9P35527 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT9P35527 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT9P35527 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KRT9P35527 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KRT9P35527 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
KRT9P35527 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT9P35527 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.24■■□□□ 1.79
KRT9P35527 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT9P35527 AC138932.3-201ENST00000567634 1902 ntBASIC26.24■■□□□ 1.79
KRT9P35527 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KRT9P35527 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
KRT9P35527 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KRT9P35527 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
KRT9P35527 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.23■■□□□ 1.79
KRT9P35527 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.23■■□□□ 1.79
KRT9P35527 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
KRT9P35527 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
KRT9P35527 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
KRT9P35527 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KRT9P35527 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
KRT9P35527 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KRT9P35527 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.21■■□□□ 1.79
KRT9P35527 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.21■■□□□ 1.79
KRT9P35527 AC126177.7-201ENST00000547904 679 ntBASIC26.21■■□□□ 1.79
KRT9P35527 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.21■■□□□ 1.79
KRT9P35527 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
KRT9P35527 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
KRT9P35527 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
KRT9P35527 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms