Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC137630.3-201ENST00000607245 391 ntBASIC34.55■■■■□ 3.12
CHD2O14647 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC34.54■■■■□ 3.12
CHD2O14647 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CHD2O14647 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CHD2O14647 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CHD2O14647 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD2O14647 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC34.53■■■■□ 3.12
CHD2O14647 RALB-208ENST00000631312 311 ntTSL 5 BASIC34.53■■■■□ 3.12
CHD2O14647 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD2O14647 AL139393.2-201ENST00000608721 2025 ntBASIC34.53■■■■□ 3.12
CHD2O14647 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD2O14647 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD2O14647 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CHD2O14647 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC34.53■■■■□ 3.12
CHD2O14647 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
CHD2O14647 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
CHD2O14647 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD2O14647 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CHD2O14647 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.52■■■■□ 3.12
CHD2O14647 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CHD2O14647 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CHD2O14647 KRT18P24-201ENST00000344739 1156 ntBASIC34.51■■■■□ 3.12
CHD2O14647 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.11
CHD2O14647 AC110285.6-201ENST00000617652 491 ntBASIC34.51■■■■□ 3.11
CHD2O14647 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC34.51■■■■□ 3.11
CHD2O14647 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CHD2O14647 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC34.5■■■■□ 3.11
CHD2O14647 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CHD2O14647 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
CHD2O14647 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.5■■■■□ 3.11
CHD2O14647 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC34.5■■■■□ 3.11
CHD2O14647 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CHD2O14647 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD2O14647 AC021242.3-201ENST00000607598 1377 ntBASIC34.49■■■■□ 3.11
CHD2O14647 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC34.49■■■■□ 3.11
CHD2O14647 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CHD2O14647 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CHD2O14647 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CHD2O14647 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CHD2O14647 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.48■■■■□ 3.11
CHD2O14647 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC34.48■■■■□ 3.11
CHD2O14647 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC34.46■■■■□ 3.11
CHD2O14647 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CHD2O14647 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
CHD2O14647 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.46■■■■□ 3.11
CHD2O14647 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.46■■■■□ 3.11
CHD2O14647 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CHD2O14647 NALT1-201ENST00000429224 738 ntTSL 5 BASIC34.45■■■■□ 3.11
CHD2O14647 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC34.45■■■■□ 3.11
CHD2O14647 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CHD2O14647 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.45■■■■□ 3.11
CHD2O14647 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC34.45■■■■□ 3.11
CHD2O14647 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.44■■■■□ 3.1
CHD2O14647 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC34.44■■■■□ 3.1
CHD2O14647 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.44■■■■□ 3.1
CHD2O14647 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CHD2O14647 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.43■■■■□ 3.1
CHD2O14647 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.43■■■■□ 3.1
CHD2O14647 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHD2O14647 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CHD2O14647 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CHD2O14647 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.42■■■■□ 3.1
CHD2O14647 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.42■■■■□ 3.1
CHD2O14647 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.41■■■■□ 3.1
CHD2O14647 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC34.41■■■■□ 3.1
CHD2O14647 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHD2O14647 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC34.41■■■■□ 3.1
CHD2O14647 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.41■■■■□ 3.1
CHD2O14647 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHD2O14647 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.4■■■■□ 3.1
CHD2O14647 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC34.4■■■■□ 3.1
CHD2O14647 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.4■■■■□ 3.1
CHD2O14647 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHD2O14647 AL117332.1-201ENST00000622628 974 ntBASIC34.39■■■■□ 3.1
CHD2O14647 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
CHD2O14647 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.39■■■■□ 3.1
CHD2O14647 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHD2O14647 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
CHD2O14647 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
CHD2O14647 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHD2O14647 TSPY9P-201ENST00000440215 945 ntBASIC34.37■■■■□ 3.09
CHD2O14647 TSPY11P-201ENST00000442607 1045 ntBASIC34.37■■■■□ 3.09
CHD2O14647 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.37■■■■□ 3.09
CHD2O14647 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.37■■■■□ 3.09
CHD2O14647 MIR4281-201ENST00000580852 62 ntBASIC34.37■■■■□ 3.09
CHD2O14647 AL136116.3-201ENST00000402907 1138 ntBASIC34.36■■■■□ 3.09
CHD2O14647 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.36■■■■□ 3.09
CHD2O14647 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.36■■■■□ 3.09
CHD2O14647 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC34.34■■■■□ 3.09
CHD2O14647 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.34■■■■□ 3.09
CHD2O14647 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
CHD2O14647 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.34■■■■□ 3.09
CHD2O14647 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
CHD2O14647 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC34.34■■■■□ 3.09
CHD2O14647 AC092028.1-203ENST00000608262 953 ntBASIC34.34■■■■□ 3.09
CHD2O14647 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
CHD2O14647 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
CHD2O14647 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHD2O14647 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CHD2O14647 KRT18P10-201ENST00000388836 1287 ntBASIC34.31■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms