Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV21A0A0B4J279 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 DUX4L11-201ENST00000611504 1267 ntBASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 DUX4L12-201ENST00000614593 1267 ntBASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 DUX4L14-201ENST00000621227 1267 ntBASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TRAV21A0A0B4J279 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 AL359258.2-201ENST00000564063 1566 ntBASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 AC093323.1-202ENST00000635031 2045 ntBASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV21A0A0B4J279 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV21A0A0B4J279 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV21A0A0B4J279 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV21A0A0B4J279 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV21A0A0B4J279 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV21A0A0B4J279 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV21A0A0B4J279 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV21A0A0B4J279 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV21A0A0B4J279 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 AL359504.2-201ENST00000605506 1601 ntBASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 RPS2P35-201ENST00000443417 897 ntBASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV21A0A0B4J279 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AC096887.2-201ENST00000623443 1957 ntBASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AC022211.4-201ENST00000625094 2161 ntBASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV21A0A0B4J279 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 AC126177.7-201ENST00000547904 679 ntBASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV21A0A0B4J279 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV21A0A0B4J279 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms