Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 AC106820.2-201ENST00000563775 3264 ntBASIC17.33■□□□□ 0.36
PKP3Q9Y446 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PKP3Q9Y446 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PKP3Q9Y446 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 ACTG1P4-201ENST00000425123 1122 ntBASIC17.32■□□□□ 0.36
PKP3Q9Y446 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 EMBP1-201ENST00000458200 901 ntBASIC17.32■□□□□ 0.36
PKP3Q9Y446 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP3Q9Y446 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PKP3Q9Y446 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 RN7SL510P-201ENST00000581311 263 ntBASIC17.31■□□□□ 0.36
PKP3Q9Y446 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP3Q9Y446 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP3Q9Y446 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 FAAHP1-202ENST00000446499 1238 ntBASIC17.3■□□□□ 0.36
PKP3Q9Y446 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 SART3-203ENST00000546611 1184 ntBASIC17.3■□□□□ 0.36
PKP3Q9Y446 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 MTDHP4-201ENST00000600287 670 ntBASIC17.3■□□□□ 0.36
PKP3Q9Y446 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP3Q9Y446 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP3Q9Y446 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms