Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 AC096633.1-201ENST00000422446 749 ntBASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 RNA5SP415-201ENST00000517246 115 ntBASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 Z83851.2-201ENST00000609564 659 ntBASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FNDC3AQ9Y2H6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.64■□□□□ 0.42
FNDC3AQ9Y2H6 AC012313.1-201ENST00000593393 3059 ntBASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 AL591424.1-201ENST00000442569 1213 ntBASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
FNDC3AQ9Y2H6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 FER1L4-210ENST00000615531 5998 ntBASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 UPF3AP3-201ENST00000420996 769 ntBASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 AC008735.5-201ENST00000623544 497 ntBASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.63■□□□□ 0.41
FNDC3AQ9Y2H6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms