Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 RPS8P6-201ENST00000426177 609 ntBASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 HTR5BP-201ENST00000430851 1154 ntBASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 ACTL9-202ENST00000612068 1252 ntBASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DENND2AQ9ULE3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 AP006288.1-201ENST00000446065 395 ntBASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DENND2AQ9ULE3 AC016396.2-201ENST00000562575 1417 ntBASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 MIR4469-201ENST00000583919 79 ntBASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 AL078644.1-201ENST00000609881 752 ntBASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DENND2AQ9ULE3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 DNAJB3-202ENST00000449667 1266 ntBASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 AL513480.1-201ENST00000451731 511 ntBASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 GNAS-203ENST00000306120 1878 ntBASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DENND2AQ9ULE3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
DENND2AQ9ULE3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DENND2AQ9ULE3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.77■□□□□ 0.91
DENND2AQ9ULE3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DENND2AQ9ULE3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DENND2AQ9ULE3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.76■□□□□ 0.91
DENND2AQ9ULE3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DENND2AQ9ULE3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.76■□□□□ 0.91
DENND2AQ9ULE3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DENND2AQ9ULE3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms