Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 AC104306.2-201ENST00000451877 341 ntBASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 EIF4HP1-201ENST00000453115 687 ntBASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC26.89■■□□□ 1.9
RIMBP3Q9UFD9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC26.89■■□□□ 1.89
RIMBP3Q9UFD9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RIMBP3Q9UFD9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC26.89■■□□□ 1.89
RIMBP3Q9UFD9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.89■■□□□ 1.89
RIMBP3Q9UFD9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 AL032819.2-201ENST00000624543 2162 ntBASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 MIR33B-201ENST00000385104 96 ntBASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RIMBP3Q9UFD9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 PRYP6-201ENST00000514804 343 ntBASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RIMBP3Q9UFD9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 CLK3P2-201ENST00000427566 1453 ntBASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 NOC2LP1-202ENST00000452600 2235 ntBASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 UPF3AP2-201ENST00000457924 1132 ntBASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.86■■□□□ 1.89
RIMBP3Q9UFD9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 CDC14C-201ENST00000428251 1719 ntBASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 RPL17P11-201ENST00000417593 544 ntBASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 RN7SL560P-201ENST00000577943 264 ntBASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RIMBP3Q9UFD9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 FAM86HP-204ENST00000513466 959 ntBASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 SLC25A47P1-201ENST00000531577 414 ntBASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 AC010328.2-201ENST00000597698 1111 ntBASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
RIMBP3Q9UFD9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms