Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ADH5P3-201ENST00000433842 1137 ntBASIC19.37■□□□□ 0.69
COL20A1Q9P218 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 SNHG9-202ENST00000564014 471 ntBASIC19.37■□□□□ 0.69
COL20A1Q9P218 AC027612.4-201ENST00000605371 583 ntBASIC19.37■□□□□ 0.69
COL20A1Q9P218 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL20A1Q9P218 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.37■□□□□ 0.69
COL20A1Q9P218 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 AC099522.2-201ENST00000607001 744 ntBASIC19.36■□□□□ 0.69
COL20A1Q9P218 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
COL20A1Q9P218 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL20A1Q9P218 FRMD8P1-201ENST00000440433 1524 ntBASIC19.35■□□□□ 0.69
COL20A1Q9P218 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 HMGA1P7-201ENST00000406908 502 ntBASIC19.35■□□□□ 0.69
COL20A1Q9P218 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.35■□□□□ 0.69
COL20A1Q9P218 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.35■□□□□ 0.69
COL20A1Q9P218 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL20A1Q9P218 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 SLC22A20-204ENST00000530038 1673 ntBASIC19.34■□□□□ 0.69
COL20A1Q9P218 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 KRT18P28-201ENST00000453838 1332 ntBASIC19.34■□□□□ 0.69
COL20A1Q9P218 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 ACTG1P14-201ENST00000446382 1122 ntBASIC19.34■□□□□ 0.69
COL20A1Q9P218 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL20A1Q9P218 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 MIR4515-201ENST00000584082 81 ntBASIC19.34■□□□□ 0.69
COL20A1Q9P218 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.34■□□□□ 0.69
COL20A1Q9P218 AL513210.1-201ENST00000629608 234 ntBASIC19.34■□□□□ 0.69
COL20A1Q9P218 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms