Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 AP002414.1-201ENST00000391405 1147 ntBASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 AC108073.2-201ENST00000464002 357 ntBASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PI4KAP1-204ENST00000612579 1703 ntBASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPHK1Q9NYA1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPHK1Q9NYA1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 MIR574-201ENST00000385209 96 ntBASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 TERC-201ENST00000602385 541 ntBASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 AC004790.2-201ENST00000623588 572 ntBASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ZNF259P1-201ENST00000407656 1365 ntBASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPHK1Q9NYA1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 EGFEM1P-202ENST00000431685 1563 ntBASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPHK1Q9NYA1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms