Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 VENTXP7-201ENST00000475503 772 ntBASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 TPSP2-201ENST00000561760 610 ntBASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 AC097374.2-201ENST00000618617 1306 ntBASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 AC125634.1-201ENST00000438758 1403 ntBASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTPS2Q9NRF8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 TNRC18P3-201ENST00000441896 2691 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC246785.2-201ENST00000432512 513 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC007967.3-201ENST00000434308 558 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 DRAXINP1-201ENST00000437611 948 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 TOB2P1-201ENST00000469761 992 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC109462.3-201ENST00000573934 613 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AP005901.3-202ENST00000581653 237 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 NPAP1P7-201ENST00000613027 823 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC093458.2-201ENST00000623150 629 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC233702.3-201ENST00000578656 1387 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC046185.3-201ENST00000623228 1824 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 AC005915.1-201ENST00000624912 2018 ntBASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTPS2Q9NRF8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 AC092053.1-201ENST00000605787 1936 ntBASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTPS2Q9NRF8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms