Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC107918.2-201ENST00000530817 355 ntBASIC18.2■□□□□ 0.5
TLR9Q9NR96 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AL135744.1-201ENST00000565098 629 ntBASIC18.2■□□□□ 0.5
TLR9Q9NR96 RARRES2P8-201ENST00000566335 367 ntBASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC051619.7-201ENST00000568314 623 ntBASIC18.2■□□□□ 0.5
TLR9Q9NR96 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC135050.7-201ENST00000624508 2218 ntBASIC18.2■□□□□ 0.5
TLR9Q9NR96 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TLR9Q9NR96 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
TLR9Q9NR96 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AL390961.4-201ENST00000623958 2535 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 FLJ13224-201ENST00000313737 1514 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 BASP1P1-201ENST00000430708 665 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AL512356.2-201ENST00000546955 174 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AC243562.1-201ENST00000560672 389 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AP001059.3-201ENST00000619053 235 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 AF228730.6-201ENST00000641497 218 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 AC084121.3-201ENST00000641716 218 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 AC105233.6-201ENST00000642093 218 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TLR9Q9NR96 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 AKAP8P1-201ENST00000434743 1349 ntBASIC18.19■□□□□ 0.5
TLR9Q9NR96 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.19■□□□□ 0.5
TLR9Q9NR96 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 REXO1L11P-201ENST00000620964 1927 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 FAM58DP-201ENST00000428076 619 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 AC055876.3-201ENST00000431496 288 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 AC138649.4-201ENST00000612222 287 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 AL139327.4-201ENST00000612362 153 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 AL133373.2-201ENST00000623187 2828 ntBASIC18.18■□□□□ 0.5
TLR9Q9NR96 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 TUBB3P1-201ENST00000405796 1332 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms