Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 GK-202ENST00000378941 458 ntTSL 3 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 AC236430.1-201ENST00000402231 743 ntBASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 TIMM8BP1-201ENST00000452384 211 ntBASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 AC002472.2-201ENST00000442739 958 ntBASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 TERF1P3-201ENST00000505638 1227 ntBASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 AC112191.1-201ENST00000523689 701 ntBASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 PI4KAP1-204ENST00000612579 1703 ntBASIC19.17■□□□□ 0.66
PDLIM7Q9NR12 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 LINC00896-202ENST00000609602 2128 ntBASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 MIR661-201ENST00000384842 89 ntBASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 SLC25A1P3-201ENST00000395415 828 ntBASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDLIM7Q9NR12 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AC055876.3-201ENST00000431496 288 ntBASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 FAM185BP-201ENST00000443595 716 ntBASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 RN7SL204P-201ENST00000582831 262 ntBASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms