Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 EGFEM1P-202ENST00000431685 1563 ntBASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 HLA-A-201ENST00000376802 1334 ntBASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 FAM215A-202ENST00000632077 792 ntBASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 AC097637.2-201ENST00000624096 1997 ntBASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 RNA5SP419-201ENST00000515908 135 ntBASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 AC006557.2-201ENST00000592985 1240 ntBASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 AL121761.2-201ENST00000598007 1648 ntBASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRDM9Q9NQV7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 AC008735.5-201ENST00000623544 497 ntBASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRDM9Q9NQV7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms