Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC003669.1-201ENST00000334569 611 ntBASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AK4P3-201ENST00000418260 669 ntBASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC011467.2-201ENST00000598425 242 ntBASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 AC138932.1-201ENST00000534164 6830 ntBASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC52A3Q9NQ40 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TUBB8P12-201ENST00000308911 1335 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TUBB7P-202ENST00000428444 1305 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TUBB8P7-204ENST00000567960 1332 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 MIR1224-201ENST00000408193 85 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 AL645929.1-201ENST00000420084 975 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 AC104076.2-201ENST00000448912 469 ntBASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC52A3Q9NQ40 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 AC008894.3-201ENST00000624324 3103 ntBASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 KRT18P57-201ENST00000443599 1254 ntBASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 AC063952.2-201ENST00000498792 1227 ntBASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 AP002490.2-201ENST00000524791 560 ntBASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC52A3Q9NQ40 AC090616.6-201ENST00000582640 721 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms