Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SLC11A2-219ENST00000549625 585 ntTSL 522.3■■□□□ 1.162e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.072e-7■■□□□ 13.5
XRN2Q9H0D6 MAP2K2-204ENST00000595715 861 ntTSL 521.44■■□□□ 1.022e-7■■□□□ 13.5
XRN2Q9H0D6 ANAPC2-203ENST00000483432 793 ntTSL 221.25■□□□□ 0.992e-7■■□□□ 13.5
XRN2Q9H0D6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.992e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)20.85■□□□□ 0.932e-7■■□□□ 13.5
XRN2Q9H0D6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.931e-6■■□□□ 13.5
XRN2Q9H0D6 SSBP4-212ENST00000601919 492 ntTSL 520.56■□□□□ 0.882e-7■■□□□ 13.5
XRN2Q9H0D6 DYNC1H1-204ENST00000555062 1351 ntTSL 220.41■□□□□ 0.862e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.862e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-211ENST00000547579 581 ntTSL 520.14■□□□□ 0.812e-7■■□□□ 13.5
XRN2Q9H0D6 PUF60-214ENST00000529693 684 ntTSL 219.9■□□□□ 0.782e-7■■□□□ 13.5
XRN2Q9H0D6 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.86■□□□□ 0.772e-7■■□□□ 13.5
XRN2Q9H0D6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.84■□□□□ 0.772e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-208ENST00000578264 1071 ntTSL 519.81■□□□□ 0.762e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.742e-7■■□□□ 13.5
XRN2Q9H0D6 PRKCD-203ENST00000464818 777 ntTSL 519.34■□□□□ 0.692e-7■■□□□ 13.5
XRN2Q9H0D6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.662e-7■■□□□ 13.5
XRN2Q9H0D6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.08■□□□□ 0.652e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.612e-7■■□□□ 13.5
XRN2Q9H0D6 DUSP6-203ENST00000547140 604 ntTSL 318.67■□□□□ 0.586e-17■■□□□ 13.5
XRN2Q9H0D6 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.35■□□□□ 0.532e-7■■□□□ 13.5
XRN2Q9H0D6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.242e-7■■□□□ 13.5
XRN2Q9H0D6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.232e-6■■□□□ 13.5
XRN2Q9H0D6 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.22e-7■■□□□ 13.5
XRN2Q9H0D6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.25■□□□□ 0.196e-17■■□□□ 13.5
XRN2Q9H0D6 MAFK-203ENST00000406174 632 ntTSL 315.94■□□□□ 0.142e-7■■□□□ 13.5
XRN2Q9H0D6 CMIP-212ENST00000623842 2685 nt15.35■□□□□ 0.052e-7■■□□□ 13.5
XRN2Q9H0D6 CDS2-206ENST00000486875 709 ntTSL 215.15■□□□□ 0.022e-7■■□□□ 13.5
XRN2Q9H0D6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-7■■□□□ 13.5
XRN2Q9H0D6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.052e-7■■□□□ 13.5
XRN2Q9H0D6 AL365181.3-201ENST00000605886 3222 ntBASIC14.67□□□□□ -0.061e-6■■□□□ 13.5
XRN2Q9H0D6 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC14.61□□□□□ -0.072e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-210ENST00000578846 4456 ntTSL 214.56□□□□□ -0.082e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.092e-7■■□□□ 13.5
XRN2Q9H0D6 MAP2K2-209ENST00000600584 2926 ntTSL 214.31□□□□□ -0.122e-7■■□□□ 13.5
XRN2Q9H0D6 AC131212.3-201ENST00000624087 4219 ntBASIC14.21□□□□□ -0.142e-7■■□□□ 13.5
XRN2Q9H0D6 STRN4-219ENST00000600615 788 ntTSL 214.18□□□□□ -0.142e-7■■□□□ 13.5
XRN2Q9H0D6 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.162e-7■■□□□ 13.5
XRN2Q9H0D6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.98□□□□□ -0.172e-7■■□□□ 13.5
XRN2Q9H0D6 CDS2-205ENST00000468817 2706 ntTSL 213.57□□□□□ -0.242e-7■■□□□ 13.5
XRN2Q9H0D6 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.342e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-207ENST00000546636 2125 ntTSL 1 (best)12.5□□□□□ -0.412e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-213ENST00000547732 546 ntTSL 411.56□□□□□ -0.562e-7■■□□□ 13.5
XRN2Q9H0D6 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.566e-17■■□□□ 13.5
XRN2Q9H0D6 MAP2K2-206ENST00000597263 552 ntTSL 311.32□□□□□ -0.62e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-209ENST00000569280 513 ntTSL 510.96□□□□□ -0.652e-7■■□□□ 13.5
XRN2Q9H0D6 ADAT2-201ENST00000237283 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.662e-7■■□□□ 13.5
XRN2Q9H0D6 PUF60-213ENST00000528999 431 ntTSL 310.94□□□□□ -0.662e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-205ENST00000566750 917 ntTSL 210.36□□□□□ -0.752e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-212ENST00000569611 556 ntTSL 410.33□□□□□ -0.762e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-208ENST00000567841 554 ntTSL 410.29□□□□□ -0.762e-7■■□□□ 13.5
XRN2Q9H0D6 SYNJ2-202ENST00000367112 5091 ntTSL 210.25□□□□□ -0.772e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.812e-7■■□□□ 13.5
XRN2Q9H0D6 TDRD9-208ENST00000557332 3338 ntTSL 29.86□□□□□ -0.832e-7■■□□□ 13.5
XRN2Q9H0D6 MAP2K2-207ENST00000599021 314 ntTSL 59.85□□□□□ -0.832e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-206ENST00000546488 569 ntTSL 49.61□□□□□ -0.872e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.992e-7■■□□□ 13.5
XRN2Q9H0D6 CFB-279ENST00000475617 586 ntTSL 48.8□□□□□ -12e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -12e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.082e-7■■□□□ 13.5
XRN2Q9H0D6 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.28□□□□□ -1.082e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.092e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-215ENST00000548193 576 ntTSL 36.86□□□□□ -1.312e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-224ENST00000550995 551 ntTSL 45.85□□□□□ -1.472e-7■■□□□ 13.5
XRN2Q9H0D6 ADAT2-202ENST00000367593 524 ntTSL 33.95□□□□□ -1.782e-7■■□□□ 13.5
XRN2Q9H0D6 NRSN2-204ENST00000492242 846 ntTSL 224.13■■□□□ 1.453e-9■■□□□ 13.5
XRN2Q9H0D6 ECHDC2-212ENST00000486170 474 ntTSL 223.69■■□□□ 1.381e-6■■□□□ 13.5
XRN2Q9H0D6 FGFR4-213ENST00000511076 838 ntTSL 522.62■■□□□ 1.213e-9■■□□□ 13.5
XRN2Q9H0D6 ECHDC2-220ENST00000498544 985 ntTSL 220.12■□□□□ 0.811e-6■■□□□ 13.5
XRN2Q9H0D6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.613e-9■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.64■□□□□ 0.571e-6■■□□□ 13.5
XRN2Q9H0D6 NRSN2-208ENST00000609179 578 ntTSL 318.1■□□□□ 0.493e-9■■□□□ 13.5
XRN2Q9H0D6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.433e-9■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-205ENST00000536846 895 ntTSL 517.36■□□□□ 0.371e-6■■□□□ 13.5
XRN2Q9H0D6 NRSN2-209ENST00000609504 582 ntTSL 317.28■□□□□ 0.363e-9■■□□□ 13.5
XRN2Q9H0D6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.283e-9■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-217ENST00000545595 1615 ntTSL 1 (best)16.71■□□□□ 0.271e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-207ENST00000537923 556 ntTSL 416.03■□□□□ 0.161e-6■■□□□ 13.5
XRN2Q9H0D6 ECHDC2-209ENST00000479183 2356 ntTSL 215.27■□□□□ 0.041e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC14.95□□□□□ -0.021e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-218ENST00000585385 976 ntTSL 514.49□□□□□ -0.091e-6■■□□□ 13.5
XRN2Q9H0D6 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC14.32□□□□□ -0.123e-9■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-201ENST00000280663 5936 ntTSL 213.37□□□□□ -0.271e-6■■□□□ 13.5
XRN2Q9H0D6 PTPRF-215ENST00000496447 5887 ntTSL 1 (best)13.36□□□□□ -0.271e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.471e-6■■□□□ 13.5
XRN2Q9H0D6 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■□□□ 13.5
XRN2Q9H0D6 PTPRF-203ENST00000372407 4600 ntTSL 211.46□□□□□ -0.581e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-206ENST00000537784 2876 ntTSL 1 (best)11.42□□□□□ -0.581e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.61e-6■■□□□ 13.5
XRN2Q9H0D6 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.631e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-203ENST00000444595 4450 ntTSL 1 (best)9.86□□□□□ -0.831e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC9.65□□□□□ -0.861e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.871e-6■■□□□ 13.5
XRN2Q9H0D6 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.881e-6■■□□□ 13.5
XRN2Q9H0D6 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.661e-6■■□□□ 13.5
XRN2Q9H0D6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.731e-8■■□□□ 13.5
XRN2Q9H0D6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.11e-8■■□□□ 13.5
XRN2Q9H0D6 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.112e-7■■□□□ 13.5
XRN2Q9H0D6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.12■■□□□ 1.135e-9■■□□□ 13.5
Retrieved 100 of 21,068 protein–RNA pairs in 109.8 ms