Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL133215.2-201ENST00000609242 977 ntBASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL25A1Q9BXS0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 HLA-H-201ENST00000383620 1096 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 IMP3P2-201ENST00000489760 475 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 SCARNA20.5-201ENST00000516991 142 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AP000812.2-201ENST00000538934 718 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 BANF1P1-201ENST00000553684 263 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AC004461.2-201ENST00000629517 803 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 AL607033.1-201ENST00000623900 1599 ntBASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.18■□□□□ 0.34
COL25A1Q9BXS0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AC026954.1-201ENST00000429771 1293 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 RPL13AP19-201ENST00000434320 584 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 BCRP2-202ENST00000447763 634 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 FTLP1-201ENST00000449155 526 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 BCRP6-201ENST00000510112 632 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 BCRP7-201ENST00000511549 544 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AC105021.1-202ENST00000570572 669 ntBASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.17■□□□□ 0.34
COL25A1Q9BXS0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 AC099778.1-201ENST00000568593 1911 ntBASIC17.16■□□□□ 0.34
COL25A1Q9BXS0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms