Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 RNA5SP419-201ENST00000515908 135 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 IGHV3-52-201ENST00000519770 353 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 SART3-203ENST00000546611 1184 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AC073592.5-201ENST00000624854 528 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AL022326.1-202ENST00000641533 845 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 ABALON-201ENST00000629058 1903 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AL049757.1-201ENST00000616842 1596 ntBASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC138028.4-201ENST00000564984 1845 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SPDYE21P-201ENST00000413323 827 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AL020989.1-201ENST00000422979 469 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC021087.4-201ENST00000563761 564 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 BX640515.1-201ENST00000617215 977 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 BICD1-207ENST00000551848 1962 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC100803.2-201ENST00000562459 1963 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 AC009949.1-201ENST00000623048 1830 ntBASIC12.04□□□□□ -0.48
UPK3BQ9BT76 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UPK3BQ9BT76 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms