Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 LINC00304-203ENST00000565008 1864 ntBASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TUBA1CQ9BQE3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 GUSBP12-201ENST00000513727 720 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AP000867.3-201ENST00000524675 377 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AL024508.2-201ENST00000607749 1894 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AL592071.1-201ENST00000611956 408 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AC124864.1-201ENST00000623408 392 ntBASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1CQ9BQE3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 AC008687.5-201ENST00000593746 558 ntBASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 AC008741.2-201ENST00000612792 3115 ntBASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TUBA1CQ9BQE3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA1CQ9BQE3 AC006449.5-201ENST00000610658 2098 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms