Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 SPDYE9P-201ENST00000570642 692 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 SPDYE10P-202ENST00000612005 668 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 SPDYE8P-202ENST00000612377 668 ntBASIC17.42■□□□□ 0.38
PHOX2BQ99453 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHOX2BQ99453 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.42■□□□□ 0.38
PHOX2BQ99453 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 MIR658-201ENST00000385210 100 ntBASIC17.41■□□□□ 0.38
PHOX2BQ99453 AL355306.1-201ENST00000415580 579 ntBASIC17.41■□□□□ 0.38
PHOX2BQ99453 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AL158211.3-201ENST00000607385 239 ntBASIC17.41■□□□□ 0.38
PHOX2BQ99453 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 SPTSSB-204ENST00000617024 1292 ntBASIC17.41■□□□□ 0.38
PHOX2BQ99453 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.41■□□□□ 0.38
PHOX2BQ99453 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PHOX2BQ99453 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHOX2BQ99453 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC079776.1-201ENST00000401540 1152 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 AL671277.1-201ENST00000429656 993 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 ACA64.2-201ENST00000459014 129 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC004890.2-204ENST00000481968 304 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC004233.3-201ENST00000607794 1269 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.4■□□□□ 0.38
PHOX2BQ99453 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 AC010460.3-201ENST00000511359 1579 ntBASIC17.4■□□□□ 0.38
PHOX2BQ99453 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHOX2BQ99453 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PHOX2BQ99453 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PHOX2BQ99453 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms