Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NCF1C-201ENST00000438382 1427 ntBASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CSPG4P5Q96PW8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SCARNA2-201ENST00000458748 420 ntBASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 MTDHP4-201ENST00000600287 670 ntBASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 AC005915.1-201ENST00000624912 2018 ntBASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 AC105020.1-201ENST00000435356 2205 ntBASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.75■□□□□ 0.43
CSPG4P5Q96PW8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 AC025062.2-201ENST00000605477 670 ntBASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 AL589182.2-201ENST00000619332 1049 ntBASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 AC106886.4-201ENST00000623557 2502 ntBASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 NKILA-202ENST00000614771 2598 ntBASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG4P5Q96PW8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 AL590787.1-201ENST00000568856 1315 ntBASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms