Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TP73-AS1-210ENST00000637775 1455 ntBASIC17.82■□□□□ 0.44
IFT43Q96FT9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 AC022211.2-201ENST00000585075 2527 ntBASIC17.81■□□□□ 0.44
IFT43Q96FT9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 AC005104.2-201ENST00000427818 678 ntBASIC17.81■□□□□ 0.44
IFT43Q96FT9 IGHV3-52-201ENST00000519770 353 ntBASIC17.81■□□□□ 0.44
IFT43Q96FT9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.81■□□□□ 0.44
IFT43Q96FT9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFT43Q96FT9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC103564.2-201ENST00000432853 1299 ntBASIC17.8■□□□□ 0.44
IFT43Q96FT9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC002558.1-201ENST00000488906 803 ntBASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC011467.2-201ENST00000598425 242 ntBASIC17.8■□□□□ 0.44
IFT43Q96FT9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 AL596257.1-201ENST00000641463 2694 ntBASIC17.8■□□□□ 0.44
IFT43Q96FT9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFT43Q96FT9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IFT43Q96FT9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 HLA-A-201ENST00000376802 1334 ntBASIC17.79■□□□□ 0.44
IFT43Q96FT9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 MRPL3P1-201ENST00000400109 1033 ntBASIC17.79■□□□□ 0.44
IFT43Q96FT9 AL022342.1-201ENST00000400363 863 ntBASIC17.79■□□□□ 0.44
IFT43Q96FT9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 AC109462.3-201ENST00000573934 613 ntBASIC17.79■□□□□ 0.44
IFT43Q96FT9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
IFT43Q96FT9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFT43Q96FT9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFT43Q96FT9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms