Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 FAM86EP-206ENST00000510506 987 ntBASIC15.52■□□□□ 0.08
PTP4A1Q93096 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 AC010331.1-201ENST00000611423 582 ntBASIC15.52■□□□□ 0.08
PTP4A1Q93096 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTP4A1Q93096 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PTP4A1Q93096 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.52■□□□□ 0.07
PTP4A1Q93096 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTP4A1Q93096 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTP4A1Q93096 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PTP4A1Q93096 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTP4A1Q93096 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTP4A1Q93096 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTP4A1Q93096 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
PTP4A1Q93096 KRT8P10-201ENST00000450021 1447 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 AC092850.2-201ENST00000623821 2697 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 AC103564.2-201ENST00000432853 1299 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 GUSBP12-201ENST00000513727 720 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 AL138831.2-201ENST00000606564 490 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.51■□□□□ 0.07
PTP4A1Q93096 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTP4A1Q93096 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.51■□□□□ 0.07
PTP4A1Q93096 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 DOC2GP-204ENST00000639052 2548 ntBASIC15.5■□□□□ 0.07
PTP4A1Q93096 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 ARMC10P1-201ENST00000313754 855 ntBASIC15.5■□□□□ 0.07
PTP4A1Q93096 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 KRT18P35-201ENST00000510488 1269 ntBASIC15.5■□□□□ 0.07
PTP4A1Q93096 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 AC011498.5-201ENST00000592027 486 ntBASIC15.5■□□□□ 0.07
PTP4A1Q93096 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.5■□□□□ 0.07
PTP4A1Q93096 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTP4A1Q93096 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 AC005332.1-201ENST00000577698 1310 ntBASIC15.49■□□□□ 0.07
PTP4A1Q93096 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTP4A1Q93096 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.49■□□□□ 0.07
PTP4A1Q93096 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms