Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCNB3Q8WWL7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCNB3Q8WWL7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 AL627223.1-201ENST00000416693 442 ntBASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 TIMM8BP1-201ENST00000452384 211 ntBASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 AC004449.1-201ENST00000564240 433 ntBASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 AC011467.4-201ENST00000594891 528 ntBASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC26.33■■□□□ 1.8
CCNB3Q8WWL7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 CROCCP2-202ENST00000412962 2773 ntBASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 AL645728.2-201ENST00000641974 660 ntBASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC26.32■■□□□ 1.8
CCNB3Q8WWL7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 AC016396.2-201ENST00000562575 1417 ntBASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 KRT8P48-201ENST00000515599 1220 ntBASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC26.31■■□□□ 1.8
CCNB3Q8WWL7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 AC026120.1-201ENST00000611536 926 ntBASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 LINC00628-201ENST00000628516 1289 ntBASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCNB3Q8WWL7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNB3Q8WWL7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms