Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AC083849.1-201ENST00000615227 514 ntBASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 AC006011.2-201ENST00000621313 1158 ntBASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 PCDHB17P-201ENST00000539533 2393 ntBASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC44A1Q8WWI5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AC005521.1-201ENST00000393351 872 ntBASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 RCN1P1-201ENST00000400413 996 ntBASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AL592071.1-201ENST00000611956 408 ntBASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC44A1Q8WWI5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 AL139384.1-201ENST00000612143 3047 ntBASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 STK19B-204ENST00000512515 211 ntBASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 AC124864.1-201ENST00000623408 392 ntBASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC44A1Q8WWI5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms