Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AC112698.1-201ENST00000510299 916 ntBASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AC006538.1-201ENST00000567905 1585 ntBASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AL391256.1-201ENST00000443260 1855 ntBASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC092338.2-201ENST00000568827 1415 ntBASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 BX088651.1-201ENST00000540551 451 ntBASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC104771.1-201ENST00000603335 964 ntBASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC009154.2-201ENST00000621177 724 ntBASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 KRT89P-201ENST00000620027 1478 ntBASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.75□□□□□ -0.05
SMIM4Q8WVI0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms