Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 STK19B-204ENST00000512515 211 ntBASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AC106795.1-205ENST00000512851 1056 ntBASIC17.49■□□□□ 0.39
PTCD2Q8WV60 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 MTDHP3-201ENST00000594186 672 ntBASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTCD2Q8WV60 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.48■□□□□ 0.39
PTCD2Q8WV60 SSR1P1-201ENST00000407630 814 ntBASIC17.48■□□□□ 0.39
PTCD2Q8WV60 AP000347.1-202ENST00000435868 847 ntBASIC17.48■□□□□ 0.39
PTCD2Q8WV60 RNA5SP419-201ENST00000515908 135 ntBASIC17.48■□□□□ 0.39
PTCD2Q8WV60 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 AL355877.3-201ENST00000622820 899 ntBASIC17.48■□□□□ 0.39
PTCD2Q8WV60 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
PTCD2Q8WV60 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AP005117.1-201ENST00000584346 1413 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AC132938.5-201ENST00000624980 1813 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms