Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 AC243591.1-201ENST00000452967 1364 ntBASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 GPR89P-201ENST00000407924 1495 ntBASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 KRT18P27-201ENST00000427733 1299 ntBASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 AC140113.2-201ENST00000604370 208 ntBASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 AC064862.7-201ENST00000604520 867 ntBASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM3Q8TF72 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 AC073621.1-201ENST00000392730 636 ntBASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 PGAM5P1-201ENST00000518923 814 ntBASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 AL356488.2-201ENST00000602755 427 ntBASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 MIR1199-201ENST00000621445 119 ntBASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 AL022326.1-202ENST00000641533 845 ntBASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM3Q8TF72 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 AC009053.2-201ENST00000563701 2365 ntBASIC17.52■□□□□ 0.39
SHROOM3Q8TF72 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AL031284.1-201ENST00000419297 478 ntBASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC025062.2-201ENST00000605477 670 ntBASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AF186996.4-201ENST00000467186 377 ntBASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms