Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP1Q8TDR0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 RHBDF1P1-201ENST00000427504 1941 ntBASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 BNIP3P18-201ENST00000593976 575 ntBASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 AL445228.2-201ENST00000605589 952 ntBASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 AC009336.1-201ENST00000608941 1553 ntBASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP1Q8TDR0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 LINC02012-201ENST00000608206 1725 ntBASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 AC073592.5-201ENST00000624854 528 ntBASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP1Q8TDR0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 INTS4P1-201ENST00000438455 1935 ntBASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAF3IP1Q8TDR0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms