Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.1■□□□□ 0.97
RTL9Q8NET4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL9Q8NET4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL9Q8NET4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 BCRP1-201ENST00000444246 691 ntBASIC21.09■□□□□ 0.97
RTL9Q8NET4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.09■□□□□ 0.97
RTL9Q8NET4 AC093512.1-201ENST00000617969 520 ntBASIC21.09■□□□□ 0.97
RTL9Q8NET4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL9Q8NET4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTL9Q8NET4 AC116353.5-201ENST00000638148 1699 ntBASIC21.08■□□□□ 0.97
RTL9Q8NET4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL9Q8NET4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTL9Q8NET4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.08■□□□□ 0.97
RTL9Q8NET4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.08■□□□□ 0.97
RTL9Q8NET4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.08■□□□□ 0.97
RTL9Q8NET4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 HMGA1P7-201ENST00000406908 502 ntBASIC21.08■□□□□ 0.96
RTL9Q8NET4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RTL9Q8NET4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.08■□□□□ 0.96
RTL9Q8NET4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTL9Q8NET4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTL9Q8NET4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL9Q8NET4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL9Q8NET4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTL9Q8NET4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RTL9Q8NET4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC023141.5-201ENST00000458585 616 ntBASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC109322.1-201ENST00000524499 1264 ntBASIC21.06■□□□□ 0.96
RTL9Q8NET4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC093520.2-201ENST00000561830 333 ntBASIC21.06■□□□□ 0.96
RTL9Q8NET4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms