Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 AC004870.1-201ENST00000315132 882 ntBASIC15.11■□□□□ 0.01
CPEB3Q8NE35 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 EMBP1-201ENST00000458200 901 ntBASIC15.11■□□□□ 0.01
CPEB3Q8NE35 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 SLC25A1P3-201ENST00000395415 828 ntBASIC15.1■□□□□ 0.01
CPEB3Q8NE35 FAAHP1-202ENST00000446499 1238 ntBASIC15.1■□□□□ 0.01
CPEB3Q8NE35 PRYP5-201ENST00000451909 266 ntBASIC15.1■□□□□ 0.01
CPEB3Q8NE35 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 SART3-203ENST00000546611 1184 ntBASIC15.1■□□□□ 0.01
CPEB3Q8NE35 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPEB3Q8NE35 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
CPEB3Q8NE35 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 RN7SL510P-201ENST00000581311 263 ntBASIC15.09■□□□□ 0.01
CPEB3Q8NE35 AL139288.1-201ENST00000623748 933 ntBASIC15.09■□□□□ 0.01
CPEB3Q8NE35 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 AP001094.4-201ENST00000579008 2176 ntBASIC15.09■□□□□ 0.01
CPEB3Q8NE35 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 AC097637.2-201ENST00000624096 1997 ntBASIC15.09■□□□□ 0.01
CPEB3Q8NE35 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.09■□□□□ 0.01
CPEB3Q8NE35 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms