Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 AL353593.2-201ENST00000602529 1483 ntBASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 IGHV3-47-201ENST00000425060 335 ntBASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 TP73-AS1-210ENST00000637775 1455 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SLC25A1P3-201ENST00000395415 828 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 KRT17P6-201ENST00000453795 1220 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 AC111152.3-201ENST00000569699 673 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 STK25P1-201ENST00000585406 838 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 BNIP3P18-201ENST00000593976 575 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 AC069148.1-201ENST00000608741 768 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 AC091076.1-201ENST00000610741 619 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 NSUN5P1-202ENST00000421140 1535 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 NSUN5P2-203ENST00000457352 1529 ntBASIC14.31□□□□□ -0.12
ZNF439Q8NDP4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 LINC00265-3P-201ENST00000447588 903 ntBASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms