Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
C3orf56Q8N813 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C3orf56Q8N813 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
C3orf56Q8N813 AL139384.1-201ENST00000612143 3047 ntBASIC13.48□□□□□ -0.25
C3orf56Q8N813 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SPDYE7P-202ENST00000420373 878 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 TREML5P-201ENST00000421694 576 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ADH5P3-201ENST00000433842 1137 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 RBPMS2P1-201ENST00000437762 623 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 AC079140.1-201ENST00000508039 487 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 STK25P1-201ENST00000585406 838 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ESPNP-201ENST00000270691 2015 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 AL049812.1-201ENST00000432563 2267 ntBASIC13.47□□□□□ -0.25
C3orf56Q8N813 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.47□□□□□ -0.25
C3orf56Q8N813 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C3orf56Q8N813 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 CRB3P1-201ENST00000449338 276 ntBASIC13.46□□□□□ -0.25
C3orf56Q8N813 KRT17P7-201ENST00000451704 1104 ntBASIC13.46□□□□□ -0.25
C3orf56Q8N813 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.46□□□□□ -0.25
C3orf56Q8N813 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C3orf56Q8N813 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms