Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 RNA5SP415-201ENST00000517246 115 ntBASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 AL356488.2-201ENST00000602755 427 ntBASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 AC027601.4-201ENST00000611259 610 ntBASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 AL139288.1-201ENST00000623748 933 ntBASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC33Q8N5R6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 COX5BP2-201ENST00000392354 334 ntBASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 FAM220CP-201ENST00000395253 831 ntBASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 MED15P5-201ENST00000423150 992 ntBASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 LINC01451-201ENST00000623792 534 ntBASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC33Q8N5R6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 PGAM5P1-201ENST00000518923 814 ntBASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 AC034105.1-201ENST00000563488 319 ntBASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 AC109462.3-201ENST00000573934 613 ntBASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 AC008735.5-201ENST00000623544 497 ntBASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC33Q8N5R6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 AP002414.3-201ENST00000589352 1468 ntBASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 PCDHA12-202ENST00000613593 2588 ntBASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms