Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 AC064836.3-201ENST00000607928 673 ntBASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ARHGEF39Q8N4T4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AL023806.1-201ENST00000603994 1649 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 MED15P5-201ENST00000423150 992 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AC007967.2-201ENST00000432613 625 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 POLD2P1-201ENST00000511220 997 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AC107918.2-201ENST00000530817 355 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 MIR4751-201ENST00000578027 74 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF39Q8N4T4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.21■□□□□ 0.18
ARHGEF39Q8N4T4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 AC108860.2-201ENST00000562760 2183 ntBASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 KRT18P3-201ENST00000451602 1288 ntBASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF39Q8N4T4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF39Q8N4T4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms