Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 TEX28P1-201ENST00000613479 1221 ntBASIC21.74■■□□□ 1.07
PROM2Q8N271 SPTSSB-204ENST00000617024 1292 ntBASIC21.74■■□□□ 1.07
PROM2Q8N271 TEX28P2-201ENST00000617764 1221 ntBASIC21.74■■□□□ 1.07
PROM2Q8N271 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.74■■□□□ 1.07
PROM2Q8N271 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PROM2Q8N271 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.74■■□□□ 1.07
PROM2Q8N271 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.74■■□□□ 1.07
PROM2Q8N271 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PROM2Q8N271 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PROM2Q8N271 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.73■■□□□ 1.07
PROM2Q8N271 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PROM2Q8N271 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 AC016027.1-202ENST00000607927 1699 ntBASIC21.73■■□□□ 1.07
PROM2Q8N271 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.73■■□□□ 1.07
PROM2Q8N271 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.73■■□□□ 1.07
PROM2Q8N271 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.73■■□□□ 1.07
PROM2Q8N271 AC092552.1-201ENST00000547243 906 ntBASIC21.73■■□□□ 1.07
PROM2Q8N271 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PROM2Q8N271 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.73■■□□□ 1.07
PROM2Q8N271 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PROM2Q8N271 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PROM2Q8N271 REXO1L6P-201ENST00000603433 1515 ntBASIC21.73■■□□□ 1.07
PROM2Q8N271 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.73■■□□□ 1.07
PROM2Q8N271 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PROM2Q8N271 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.73■■□□□ 1.07
PROM2Q8N271 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PROM2Q8N271 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PROM2Q8N271 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 AP006294.1-201ENST00000415407 339 ntBASIC21.72■■□□□ 1.07
PROM2Q8N271 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.72■■□□□ 1.07
PROM2Q8N271 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.72■■□□□ 1.07
PROM2Q8N271 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PROM2Q8N271 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PROM2Q8N271 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PROM2Q8N271 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.71■■□□□ 1.07
PROM2Q8N271 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PROM2Q8N271 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 RPL37AP1-201ENST00000412502 279 ntBASIC21.71■■□□□ 1.07
PROM2Q8N271 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
PROM2Q8N271 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.71■■□□□ 1.07
PROM2Q8N271 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.71■■□□□ 1.07
PROM2Q8N271 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.71■■□□□ 1.07
PROM2Q8N271 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 WASH4P-201ENST00000564273 1246 ntBASIC21.71■■□□□ 1.07
PROM2Q8N271 AL390728.6-201ENST00000566446 1246 ntBASIC21.71■■□□□ 1.07
PROM2Q8N271 MIR4525-201ENST00000580000 75 ntBASIC21.71■■□□□ 1.07
PROM2Q8N271 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.71■■□□□ 1.07
PROM2Q8N271 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PROM2Q8N271 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PROM2Q8N271 REXO1L11P-201ENST00000620964 1927 ntBASIC21.7■■□□□ 1.07
PROM2Q8N271 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
PROM2Q8N271 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.7■■□□□ 1.06
PROM2Q8N271 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.7■■□□□ 1.06
PROM2Q8N271 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.7■■□□□ 1.06
PROM2Q8N271 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.7■■□□□ 1.06
PROM2Q8N271 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.7■■□□□ 1.06
PROM2Q8N271 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PROM2Q8N271 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms