Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.62■□□□□ 0.41
SIX5Q8N196 FO538757.1-201ENST00000623083 1397 ntBASIC17.62■□□□□ 0.41
SIX5Q8N196 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SIX5Q8N196 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX5Q8N196 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
SIX5Q8N196 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SIX5Q8N196 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.61■□□□□ 0.41
SIX5Q8N196 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SIX5Q8N196 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.61■□□□□ 0.41
SIX5Q8N196 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.61■□□□□ 0.41
SIX5Q8N196 SLC25A39P2-201ENST00000537614 270 ntBASIC17.61■□□□□ 0.41
SIX5Q8N196 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.61■□□□□ 0.41
SIX5Q8N196 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.61■□□□□ 0.41
SIX5Q8N196 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SIX5Q8N196 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.61■□□□□ 0.41
SIX5Q8N196 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 BX323043.1-201ENST00000641006 1765 ntBASIC17.61■□□□□ 0.41
SIX5Q8N196 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIX5Q8N196 AC009949.1-201ENST00000623048 1830 ntBASIC17.61■□□□□ 0.41
SIX5Q8N196 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.6■□□□□ 0.41
SIX5Q8N196 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 AC012313.1-201ENST00000593393 3059 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.6■□□□□ 0.41
SIX5Q8N196 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SIX5Q8N196 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
SIX5Q8N196 TREML5P-201ENST00000421694 576 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 ACTG1P4-201ENST00000425123 1122 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 RBPMS2P1-201ENST00000437762 623 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 AC140658.5-201ENST00000438532 169 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 AP005018.1-201ENST00000525475 301 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.6■□□□□ 0.41
SIX5Q8N196 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.6■□□□□ 0.41
SIX5Q8N196 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 AC104581.1-202ENST00000635932 2618 ntBASIC17.6■□□□□ 0.41
SIX5Q8N196 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIX5Q8N196 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SIX5Q8N196 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.59■□□□□ 0.41
SIX5Q8N196 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIX5Q8N196 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.59■□□□□ 0.41
SIX5Q8N196 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.59■□□□□ 0.41
SIX5Q8N196 AL512638.1-201ENST00000457493 794 ntBASIC17.59■□□□□ 0.41
SIX5Q8N196 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms