Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL23A1Q86Y22 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SLC22A20-204ENST00000530038 1673 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 AC087499.5-201ENST00000452760 1342 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 AL512384.1-201ENST00000406683 331 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 HCG4-201ENST00000418983 998 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 GNAQP1-201ENST00000444815 1067 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 TEX28P1-201ENST00000613479 1221 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 TEX28P2-201ENST00000617764 1221 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.37■■□□□ 1.01
COL23A1Q86Y22 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.37■■□□□ 1.01
COL23A1Q86Y22 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 MIR658-201ENST00000385210 100 ntBASIC21.36■■□□□ 1.01
COL23A1Q86Y22 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 MIR3909-201ENST00000579518 119 ntBASIC21.36■■□□□ 1.01
COL23A1Q86Y22 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 AC084346.2-201ENST00000607097 949 ntBASIC21.36■■□□□ 1.01
COL23A1Q86Y22 MIR6805-201ENST00000615055 62 ntBASIC21.36■■□□□ 1.01
COL23A1Q86Y22 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.36■■□□□ 1.01
COL23A1Q86Y22 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 RN7SL752P-201ENST00000463779 287 ntBASIC21.35■■□□□ 1.01
COL23A1Q86Y22 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL23A1Q86Y22 RNF165-205ENST00000588679 2904 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms