Protein–RNA interactions for Protein: Q86X52

CHSY1, Chondroitin sulfate synthase 1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1Q86X52 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHSY1Q86X52 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
CHSY1Q86X52 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.03■□□□□ 0.48
CHSY1Q86X52 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHSY1Q86X52 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 HNRNPDP1-201ENST00000439535 754 ntBASIC18.02■□□□□ 0.48
CHSY1Q86X52 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.02■□□□□ 0.48
CHSY1Q86X52 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHSY1Q86X52 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
CHSY1Q86X52 NKILA-202ENST00000614771 2598 ntBASIC18.02■□□□□ 0.47
CHSY1Q86X52 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.02■□□□□ 0.47
CHSY1Q86X52 AC046185.3-201ENST00000623228 1824 ntBASIC18.02■□□□□ 0.47
CHSY1Q86X52 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CHSY1Q86X52 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHSY1Q86X52 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 HLA-A-201ENST00000376802 1334 ntBASIC18.01■□□□□ 0.47
CHSY1Q86X52 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 PRYP5-201ENST00000451909 266 ntBASIC18.01■□□□□ 0.47
CHSY1Q86X52 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.01■□□□□ 0.47
CHSY1Q86X52 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 FAM215A-202ENST00000632077 792 ntBASIC18.01■□□□□ 0.47
CHSY1Q86X52 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHSY1Q86X52 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
CHSY1Q86X52 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18■□□□□ 0.47
CHSY1Q86X52 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18■□□□□ 0.47
CHSY1Q86X52 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18■□□□□ 0.47
CHSY1Q86X52 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CHSY1Q86X52 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHSY1Q86X52 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18■□□□□ 0.47
CHSY1Q86X52 LAGE3P1-201ENST00000425356 484 ntBASIC18■□□□□ 0.47
CHSY1Q86X52 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18■□□□□ 0.47
CHSY1Q86X52 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms