Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 LINC00896-202ENST00000609602 2128 ntBASIC16.55■□□□□ 0.24
RNF44Q7L0R7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RNF44Q7L0R7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AP002414.3-201ENST00000589352 1468 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AC016396.2-201ENST00000562575 1417 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AC136632.2-201ENST00000512891 861 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AL356488.2-201ENST00000602755 427 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 BX640515.1-201ENST00000617215 977 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 GPR89P-201ENST00000407924 1495 ntBASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF44Q7L0R7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 IL9RP2-201ENST00000423948 1312 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AC006504.4-201ENST00000592118 1568 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AL590627.1-203ENST00000421194 1026 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AC098831.1-202ENST00000438821 336 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AC092910.1-201ENST00000482027 1129 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 MIR1199-201ENST00000621445 119 ntBASIC16.53■□□□□ 0.24
RNF44Q7L0R7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF44Q7L0R7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms