Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 HCG11-201ENST00000411553 5696 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 AC097637.2-201ENST00000624096 1997 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 RNA5SP415-201ENST00000517246 115 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 AL671883.3-201ENST00000603274 991 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 Z83851.2-201ENST00000609564 659 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 AC117500.6-201ENST00000624871 588 ntBASIC18.37■□□□□ 0.53
VSTM1Q6UX27 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
VSTM1Q6UX27 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 KRT18P58-201ENST00000527480 1120 ntBASIC18.36■□□□□ 0.53
VSTM1Q6UX27 UNC93B6-202ENST00000528242 690 ntBASIC18.36■□□□□ 0.53
VSTM1Q6UX27 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 AC104109.2-201ENST00000602919 1418 ntBASIC18.36■□□□□ 0.53
VSTM1Q6UX27 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 AC046185.3-201ENST00000623228 1824 ntBASIC18.36■□□□□ 0.53
VSTM1Q6UX27 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSTM1Q6UX27 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ELK2BP-201ENST00000415014 1224 ntBASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ACTG1P4-201ENST00000425123 1122 ntBASIC18.35■□□□□ 0.53
VSTM1Q6UX27 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VSTM1Q6UX27 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VSTM1Q6UX27 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms