Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF16Q5VV41 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ARHGEF16Q5VV41 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF16Q5VV41 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF16Q5VV41 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF16Q5VV41 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 AL596442.2-201ENST00000610240 980 ntBASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 AC018470.1-201ENST00000624790 3129 ntBASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 GNAS-203ENST00000306120 1878 ntBASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF16Q5VV41 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 CEND1P1-201ENST00000451006 455 ntBASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF16Q5VV41 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 ELL2P1-201ENST00000413990 1906 ntBASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 FAM58CP-201ENST00000435741 640 ntBASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 AP006288.1-201ENST00000446065 395 ntBASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF16Q5VV41 AC016396.2-201ENST00000562575 1417 ntBASIC19.42■□□□□ 0.7
ARHGEF16Q5VV41 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ARHGEF16Q5VV41 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms