Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13DQ5THJ4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AL080243.2-201ENST00000418783 582 ntBASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LINC01451-201ENST00000623792 534 ntBASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AC008267.7-201ENST00000624570 1194 ntBASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 AL359881.2-201ENST00000602973 570 ntBASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
VPS13DQ5THJ4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AC138028.4-201ENST00000564984 1845 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 LINC00895-201ENST00000629028 1637 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 IGHV3-62-201ENST00000520057 340 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AL355312.1-201ENST00000407115 2176 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AC027307.3-201ENST00000594262 1100 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AC008494.3-201ENST00000606615 944 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 AC133963.1-201ENST00000504166 1679 ntBASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.41□□□□□ -0.58
VPS13DQ5THJ4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms