Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC141257.4-201ENST00000634557 245 ntBASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC136944.6-201ENST00000634818 245 ntBASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC010460.3-201ENST00000511359 1579 ntBASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00242Q5T6M2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AL353692.3-201ENST00000407031 1396 ntBASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 EGFEM1P-202ENST00000431685 1563 ntBASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 IGHGP-201ENST00000390555 1178 ntBASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 HLA-F-220ENST00000434407 884 ntBASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms