Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 ZNF767P-206ENST00000513792 565 ntBASIC14.77□□□□□ -0.04
LRRK2Q5S007 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 MIR3909-201ENST00000579518 119 ntBASIC14.77□□□□□ -0.04
LRRK2Q5S007 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRK2Q5S007 ANO7L1-203ENST00000602586 1720 ntBASIC14.77□□□□□ -0.04
LRRK2Q5S007 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRK2Q5S007 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.77□□□□□ -0.04
LRRK2Q5S007 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 AC105233.2-201ENST00000523697 349 ntBASIC14.77□□□□□ -0.05
LRRK2Q5S007 AF228730.5-201ENST00000530288 346 ntBASIC14.77□□□□□ -0.05
LRRK2Q5S007 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.77□□□□□ -0.05
LRRK2Q5S007 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRK2Q5S007 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC091167.2-201ENST00000579581 588 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AL135999.2-201ENST00000622438 1686 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AL096828.2-201ENST00000567259 1965 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC046185.3-201ENST00000623228 1824 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 RNU1-129P-201ENST00000384064 167 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC142381.1-201ENST00000426099 345 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 U1.21-201ENST00000580816 167 ntBASIC14.76□□□□□ -0.05
LRRK2Q5S007 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRK2Q5S007 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LRRK2Q5S007 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AC012569.1-201ENST00000591191 1524 ntBASIC14.75□□□□□ -0.05
LRRK2Q5S007 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AC098850.1-201ENST00000419919 790 ntBASIC14.75□□□□□ -0.05
LRRK2Q5S007 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 ELK1P1-201ENST00000485699 580 ntBASIC14.75□□□□□ -0.05
LRRK2Q5S007 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRK2Q5S007 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms